gensearch: Whole genome search.
In colocalized: Clusters of Colocalized Sequences
Description
Usage
Arguments
Value
Description
Search the whole genome for clusters of colocalized TF binding sequences.
Usage
1
Arguments
choose
List of .bed tables
n
The cut-off distance
cores
Number of cores for parallel processing. Leaving this blank causes the program to use default (series) processing
Value
Table containing the addresses (as one dimensional intervals) of the members of every cluster, with some annotation data.
colocalized documentation built on Oct. 30, 2019, 10:49 a.m.
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Description Usage Arguments Value
Description
Search the whole genome for clusters of colocalized TF binding sequences.
Usage
1 |
Arguments
choose |
List of .bed tables |
n |
The cut-off distance |
cores |
Number of cores for parallel processing. Leaving this blank causes the program to use default (series) processing |
Value
Table containing the addresses (as one dimensional intervals) of the members of every cluster, with some annotation data.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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