onedim_dist: Create a colocalization matrix
In colocalized: Clusters of Colocalized Sequences
Description
Usage
Arguments
Value
Examples
Description
Create a colocalization matrix
Usage
1
onedim_dist(bed1, bed2, n)
Arguments
bed1
A .bed table
bed2
A .bed table
n
The cut-off distance
Value
A colocalization matrix whose dimensions are the number of rows in
bed1 by the number of rows in bed2. Entry i,j is a 1 if the ith
sequence in bed1 is within the cut-off distance of the jth sequence
in bed2, and 0 otherwise.
Examples
1
2
colocalized documentation built on Oct. 30, 2019, 10:49 a.m.
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Description Usage Arguments Value Examples
Description
Create a colocalization matrix
Usage
1 | onedim_dist(bed1, bed2, n)
|
Arguments
bed1 |
A .bed table |
bed2 |
A .bed table |
n |
The cut-off distance |
Value
A colocalization matrix whose dimensions are the number of rows in
bed1 by the number of rows in bed2. Entry i,j is a 1 if the ith
sequence in bed1 is within the cut-off distance of the jth sequence
in bed2, and 0 otherwise.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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