Man pages for cpgen
Parallelized Genomic Prediction and GWAS

ccolmvColwise means or variances
ccovccov
ccrossccross
cCVGenerate phenotype vectors for cross validation
cGBLUPGenomic BLUP
cgrmGenomic Relationship Matrices
cgrm.AAdditive Genomic Relationship Matrix
cgrm.DDominance Genomic Relationship Matrix
cGWASGenomewide Association Study
cGWAS.emmaxGenomewide Association Study - EMMAX
check_openmpCheck OpenMP-support.
clmmLinear Mixed Models using Gibbs Sampling
cmafcmaf
cpgen-packagecpgen - Parallel genomic evaluations
cpgen-parallelMultithreading using 'cpgen'
cpowopSquare matrix power operator
crossprodop(Parallel) Matrix product operator
cscale_inplacecscale_inplace
cscanxRead in a matrix from a file
csolvecsolve
cSSBRSingle Step Bayesian Regression
cSSBR.setupPreparing Model terms for Single Step Bayesian Regression
get_corCompute the prediction accuracy from Cross Validition
get_max_threadsGet the maximum number of threads available
get_num_threadsGet the number of threads for 'cpgen'
get_predExtract predictions vectors of an object returned by 'clmm'...
rand_dataGenerate random data for test purposes
set_num_threadsSet the number of OpenMP threads used by the functions of...
cpgen documentation built on May 29, 2017, 9:40 p.m.