cmaf: cmaf

In cpgen: Parallelized Genomic Prediction and GWAS

Description

Computes the minor allele frequencies of a marker-matrix.

Usage

cmaf(X)	

Arguments

X	Marker matrix with {-1,0,1} coding

Value

Numeric Vector of minor allele frequencies for every column in X

Examples

# generate random data
rand_data(500,5000)

# compute minor allele frequencies
mafs <- cmaf(M)

cpgen documentation built on May 2, 2019, 8:15 a.m.