mcmc_mix2_wrapper: Wrapper of mcmc_mix2

In crandep: Network Analysis of Dependencies of CRAN Packages

Wrapper of mcmc_mix2

Description

Wrapper of mcmc_mix2

Usage

mcmc_mix2_wrapper(
  df,
  seed,
  a_psiu = 0.001,
  b_psiu = 0.9,
  m_alpha = 0,
  s_alpha = 10,
  a_theta = 1,
  b_theta = 1,
  m_shape = 0,
  s_shape = 10,
  a_sigma = 1,
  b_sigma = 0.01,
  a_pseudo = 10,
  b_pseudo = 1,
  pr_power = 0.5,
  positive = FALSE,
  iter = 20000L,
  thin = 20L,
  burn = 100000L,
  freq = 1000L,
  mc3 = FALSE,
  invts = 0.001^((0:8)/8),
  name = TRUE
)

Arguments

df	A data frame with at least two columns, x & count
seed	Integer for set.seed
a_psiu, b_psiu, m_alpha, s_alpha, a_theta, b_theta, m_shape, s_shape, a_sigma, b_sigma	Scalars, real numbers representing the hyperparameters of the prior distributions for the respective parameters. See details for the specification of the priors.
a_pseudo	Positive real number, first parameter of the pseudoprior beta distribution for theta in model selection; ignored if pr_power = 1.0
b_pseudo	Positive real number, second parameter of the pseudoprior beta distribution for theta in model selection; ignored if pr_power = 1.0
pr_power	Real number in [0, 1], prior probability of the discrete power law (below u)
positive	Boolean, is alpha positive (TRUE) or unbounded (FALSE)?
iter	Positive integer representing the length of the MCMC output
thin	Positive integer representing the thinning in the MCMC
burn	Non-negative integer representing the burn-in of the MCMC
freq	Positive integer representing the frequency of the sampled values being printed
mc3	Boolean, is Metropolis-coupled MCMC to be used?
invts	Vector of the inverse temperatures for Metropolis-coupled MCMC; ignored if mc3 = FALSE
name	Boolean; if the column name exists, are its unique values printed?

Value

A list returned by mcmc_mix2

crandep documentation built on Nov. 22, 2023, 1:08 a.m.