Man pages for ctsem
Continuous Time Structural Equation Modelling

AnomAuthAnomAuth
ctCheckFitCheck absolute fit of ctFit or ctStanFit object.
ctCIctCI Computes confidence intervals on specified parameters /...
ctCollapsectCollapse Easily collapse an array margin using a specified...
ctCompareExpectedctCompareExpected Compares model implied to observed means...
ctDeintervalisectDeintervalise
ctDensityctDensity
ctDiscreteParsctDiscretePars
ctDiscretiseDataDiscretise long format continuous time (ctsem) data to...
ctExample1ctExample1
ctExample1TIpredctExample1TIpred
ctExample2ctExample2
ctExample2levelctExample2level
ctExample3ctExample3
ctExample4ctExample4
ctFitFit a ctsem object
ctFitRFit ctsem models with Kalman filter R code - slower!
ctGeneratectGenerate
ctGenerateFromFitGenerates data according to the model estimated in a ctsemFit...
ctIndplotctIndplot
ctIntervaliseConverts absolute times to intervals for wide format ctsem...
ctKalmanctKalman
ctKalmanPlotctKalmanPlot
ctLongToWidectLongToWide Restructures time series / panel data from long...
ctModelDefine a ctsem model
ctModelFromFitExtract a ctsem model structure with parameter values from a...
ctMultigroupFitFits a multiple group continuous time model.
ctPlotctPlot
ctPlotArrayPlots three dimensional y values for quantile plots
ctPolyPlots uncertainty bands with shading
ctPostPredictPosterior predictive type check for ctsemFit.
ctRefineToctRefineTo
ctsemctsem
ctStanContinuousParsctStanContinuousPars
ctStanDiscreteParsctStanDiscretePars
ctStanDiscreteParsPlotctStanDiscreteParsPlot
ctStanFitctStanFit
ctStanModelConvert a frequentist (omx) ctsem model specification to...
ctStanParMatricesReturns model equation and other matrices from a ctStanFit...
ctStanParnamesctStanParnames
ctStanPlotPostctStanPlotPost
ctStanPostPredictCompares model implied density and values to observed, for a...
ctstantestdatctstantestdat
ctstantestfitctstantestfit
ctStanTIpredeffectsGet time independent predictor effect estimates
ctStanTIpredMarginalPlot marginal relationships between covariates and parameters...
ctWideNamesctWideNames sets default column names for wide ctsem...
ctWideToLongctWideToLong Convert ctsem wide to long format
datastructuredatastructure
inv_logitInverse logit
isdiagDiagnostics for ctsem importance sampling
KalmanKalman
longexamplelongexample
msquareRight multiply a matrix by its transpose.
OscillatingOscillating
plot.ctsemFitPlotting function for object class ctsemFit
plot.ctsemFitMeasureMisspecification plot using ctCheckFit output
plot.ctsemMultigroupFitPlot function for ctsemMultigroupFit object
plot.ctStanFitplot.ctStanFit
plot.ctStanModelPrior plotting
sdpcor2covsdcor2cov
stan_checkdivergencesAnalyse divergences in a stanfit object
stan_confidenceRegionExtract functions of multiple variables from a stanfit object
stan_postcalcCompute functions of matrices from samples of a stanfit...
stanWplotRuns stan, and plots sampling information while sampling.
summary.ctsemFitSummary function for ctsemFit object
summary.ctsemMultigroupFitSummary function for ctsemMultigroupFit object
summary.ctStanFitsummary.ctStanFit
ctsem documentation built on June 26, 2018, 1 a.m.