Man pages for cutpointr
Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks
| abs_d_ppv_npv | Calculate the absolute difference of positive and negative... |
| abs_d_sens_spec | Calculate the absolute difference of sensitivity and... |
| accuracy | Calculate accuracy |
| add_metric | Add metrics to a cutpointr or roc_cutpointr object |
| auc | Calculate AUC from a roc_cutpointr or cutpointr object |
| boot_ci | Calculate bootstrap confidence intervals from a cutpointr... |
| boot_test | Test for equivalence of a metric |
| cohens_kappa | Calculate Cohen's Kappa |
| cutpoint | Extract the cutpoints from a ROC curve generated by cutpointr |
| cutpoint_knots | Calculate number of knots to use in spline smoothing |
| cutpointr | Determine and evaluate optimal cutpoints |
| cutpointr_ | The standard evaluation version of cutpointr (deprecated) |
| F1_score | Calculate the F1-score |
| false_omission_rate | Calculate the false omission and false discovery rate |
| Jaccard | Calculate the Jaccard Index |
| maximize_boot_metric | Optimize a metric function in binary classification after... |
| maximize_gam_metric | Optimize a metric function in binary classification after... |
| maximize_loess_metric | Optimize a metric function in binary classification after... |
| maximize_metric | Optimize a metric function in binary classification |
| maximize_spline_metric | Optimize a metric function in binary classification after... |
| metric_constrain | Metrics that are constrained by another metric |
| misclassification_cost | Calculate the misclassification cost |
| multi_cutpointr | Calculate optimal cutpoints and further statistics for... |
| npv | Calculate the negative predictive value |
| oc_manual | Set a manual cutpoint for use with cutpointr |
| oc_mean | Use the sample mean as cutpoint |
| oc_median | Use the sample median as cutpoint |
| oc_youden_kernel | Determine an optimal cutpoint maximizing the Youden-Index... |
| oc_youden_normal | Determine an optimal cutpoint for the Youden-Index assuming... |
| odds_ratio | Calculate the odds ratio |
| p_chisquared | Calculate the p-value of a chi-squared test |
| plot_cut_boot | Plot the bootstrapped distribution of optimal cutpoints from... |
| plot_cutpointr | General purpose plotting function for cutpointr or... |
| plot.cutpointr | Plot cutpointr objects |
| plot_metric | Plot a metric over all possible cutoffs from a cutpointr... |
| plot_metric_boot | Plot the bootstrapped metric distribution from a cutpointr... |
| plot.multi_cutpointr | Plotting multi_cutpointr objects is currently not supported |
| plot_precision_recall | Precision recall plot from a cutpointr object |
| plot_roc | Plot ROC curve from a cutpointr or roc_cutpointr object |
| plot.roc_cutpointr | Plot ROC curve from a cutpointr or roc_cutpointr object |
| plot_sensitivity_specificity | Sensitivity and specificity plot from a cutpointr object |
| plot_x | Plot the distribution of the independent variable per class... |
| plr | Calculate the positive or negative likelihood ratio |
| ppv | Calculate the positive predictive value |
| precision | Calculate precision |
| predict.cutpointr | Predict using a cutpointr object |
| print.cutpointr | Print cutpointr objects |
| print.multi_cutpointr | Print multi_cutpointr objects |
| prod_ppv_npv | Calculate the product of positive and negative predictive... |
| prod_sens_spec | Calculate the product of sensitivity and specificity |
| prostate_nodal | Nodal involvement and acid phosphatase levels in 53 prostate... |
| recall | Calculate recall |
| risk_ratio | Calculate the risk ratio (relative risk) |
| roc | Calculate a ROC curve |
| roc01 | Calculate the distance between points on the ROC curve and... |
| sensitivity | Calculate sensitivity |
| specificity | Calculate specificity |
| suicide | Suicide attempts and DSI sum scores of 532 subjects |
| sum_ppv_npv | Calculate the sum of positive and negative predictive value |
| sum_sens_spec | Calculate the sum of sensitivity and specificity |
| total_utility | Calculate the total utility |
| tp | Extract number true / false positives / negatives |
| tpr | Calculate true / false positive / negative rate |
| user_span_cutpointr | Calculate bandwidth for LOESS smoothing of metric functions... |
| youden | Calculate the Youden-Index |
