morse: Import 'morse' model parameters
In cvasi: Calibration, Validation, and Simulation of TKTD Models

morse

R Documentation

Import `morse` model parameters

Description

Loads GUTS model parameters which were fitted by the morse package.

Usage

morse(
  file,
  find.SD = TRUE,
  find.IT = TRUE,
  reset.hb = TRUE,
  params = c("estim", "all"),
  mcmc.size
)

Arguments

`file`	Path to .RData file
`find.SD`	a logical value. If `TRUE`, it will try to find fitted parameters of the GUTS_SD model
`find.IT`	a logical value. If `TRUE`, it will try to find fitted parameters of the GUTS_IT model
`reset.hb`	a logical value. If `TRUE`, the background hazard rate `hb` is set to zero
`params`	`character`, if `"estim"` is selected then only the fitted parameter set for each model is returned, else for `"auto"` all parameter sets in the MCM chains are returned
`mcmc.size`	optional `integer`, sets the maximum number of imported parameter sets per MCMC, all parameters are imported by default

Value

vector of parameter_set objects

Examples

# import all parameter fits
try(morse("path/to/morse_fit.RData"))

# import parameters for a specific model
try(morse("path/to/morse_fit.RData", find.IT=TRUE, find.SD=FALSE))

# modify model objects
try(models %>% set_param(morse("path/to/morse_fit.RData")))

cvasi documentation built on Sept. 23, 2024, 9:08 a.m.