cluster_plot: plots the expression matrix of a flowframe analysed with...
In cyanoFilter: Cyanobacteria Population Identification for Flow Cytometry
View source: R/plotting_functions.R
Description
plots the expression matrix of a flowframe analysed with celldebris_emclustering.
Usage
1
cluster_plot(flowfile, channels, mus = NULL, tau = NULL, classifier)
Arguments
flowfile
flowframe to be plotted
channels
channels used in gating
mus
matrix of means obtained from celldebris_emclustering
tau
vector of cluster weights obtained from celldebris_emclustering
classifier
cells will be assigned to a cluster if belongs to that cluster
by at least this probability. Only for plotting purposes.
cyanoFilter documentation built on Jan. 9, 2020, 5:08 p.m.
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View source: R/plotting_functions.R
Description
plots the expression matrix of a flowframe analysed with celldebris_emclustering.
Usage
1 | cluster_plot(flowfile, channels, mus = NULL, tau = NULL, classifier)
|
Arguments
flowfile |
flowframe to be plotted |
channels |
channels used in gating |
mus |
matrix of means obtained from celldebris_emclustering |
tau |
vector of cluster weights obtained from celldebris_emclustering |
classifier |
cells will be assigned to a cluster if belongs to that cluster by at least this probability. Only for plotting purposes. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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