Description Usage Arguments Value See Also

Methods defined for S4 class `Coutput`

.

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 | ```
## S4 method for signature 'Coutput'
show(object)
## S4 method for signature 'Coutput'
ratio(x)
## S4 method for signature 'Coutput'
zscore(x)
## S4 method for signature 'Coutput'
pvalue(x)
## S4 method for signature 'Coutput'
adjp(x)
## S4 method for signature 'Coutput'
cnetwork(x)
## S4 method for signature 'Coutput'
write(x, file = "Coutput.txt", saveBy = c("adjp",
"pvalue", "zscore", "ratio"), verbose = T)
``` |

`object` |
an object of S4 class |

`x` |
an object of S4 class |

`file` |
a character specifying a file name written into. By default, it is 'Coutput.txt' |

`saveBy` |
which statistics will be saved. It can be "pvalue" for p value, "adjp" for adjusted p value, "zscore" for z-score, "ratio" for ratio |

`verbose` |
logical to indicate whether the messages will be displayed in the screen. By default, it sets to true for display |

write(x) also returns a symmetrix matrix storing the specific statistics

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