detectRUNS: Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes

Detection of runs of homozygosity and of heterozygosity in diploid genomes using two methods: sliding windows (Purcell et al (2007) <doi:10.1086/519795>) and consecutive runs (Marras et al (2015) <doi:10.1111/age.12259>).

Package details

AuthorFilippo Biscarini [aut, cre], Paolo Cozzi [aut], Giustino Gaspa [aut], Gabriele Marras [aut]
MaintainerFilippo Biscarini <[email protected]>
LicenseGPL-3
Version0.9.5
URL https://github.com/bioinformatics-ptp/detectRUNS/tree/master/detectRUNS
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("detectRUNS")

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detectRUNS documentation built on Feb. 6, 2018, 5:01 p.m.