API for detectRUNS
Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes

Global functions
Froh_inbreeding Man page Source code
Froh_inbreedingClass Man page Source code
chromosomeLength Man page Source code
consecutiveRUNS.run Man page Source code
consecutiveRuns Man page Source code
consecutiveRunsCpp Man page Source code
createRUNdf Man page Source code
fast_factor Source code
findOppositeAndMissing Man page Source code
genoConvert Man page Source code
genoConvertCpp Man page Source code
heteroZygotTest Man page Source code
heteroZygotTestCpp Man page Source code
homoZygotTest Man page Source code
homoZygotTestCpp Man page Source code
onAttach Source code
onUnload Source code
pedConvertCpp Man page Source code
plot_DistributionRuns Man page Source code
plot_InbreedingChr Man page Source code
plot_PatternRuns Man page Source code
plot_Runs Man page Source code
plot_SnpsInRuns Man page Source code
plot_StackedRuns Man page Source code
plot_ViolinRuns Man page Source code
plot_manhattanRuns Man page Source code
readExternalRuns Man page Source code
readPOPCpp Man page Source code
reorderDF Man page Source code
slidingRUNS.run Man page Source code
slidingRuns Man page Source code
slidingWindow Man page Source code
slidingWindowCpp Man page Source code
snpInRun Man page Source code
snpInRunCpp Man page Source code
snpInsideRuns Man page Source code
snpInsideRunsCpp Man page Source code
summaryRuns Man page Source code
tableRuns Man page Source code
writeRUN Man page Source code
detectRUNS documentation built on Feb. 6, 2018, 5:01 p.m.