Files in detectRUNS
Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
MD5
NEWS.md
DESCRIPTION
README.md
NAMESPACE
inst/doc/detectRUNS.vignette.Rmd
inst/doc/detectRUNS.vignette.R
inst/doc/detectRUNS.vignette.html
inst/extdata/Kijas2016_Sheep_subset.map
inst/extdata/Kijas2016_Sheep_subset.consecutive.csv
inst/extdata/Kijas2016_Sheep_subset.ped
inst/extdata/Kijas2016_Sheep_subset.sliding.csv
vignettes/detectRUNS.vignette.Rmd
vignettes/rog.png
R/funktionen.R
R/zzz.R
R/run.R
R/plots.R
R/RcppExports.R
R/Stats.R
src/RcppExports.cpp
src/functions.cpp
man/writeRUN.Rd
man/heteroZygotTestCpp.Rd
man/Froh_inbreedingClass.Rd
man/plot_PatternRuns.Rd
man/slidingRuns.Rd
man/snpInsideRunsCpp.Rd
man/plot_DistributionRuns.Rd
man/consecutiveRunsCpp.Rd
man/slidingWindowCpp.Rd
man/consecutiveRUNS.run.Rd
man/readPOPCpp.Rd
man/snpInsideRuns.Rd
man/readExternalRuns.Rd
man/plot_ViolinRuns.Rd
man/reorderDF.Rd
man/consecutiveRuns.Rd
man/plot_StackedRuns.Rd
man/plot_manhattanRuns.Rd
man/heteroZygotTest.Rd
man/plot_SnpsInRuns.Rd
man/genoConvertCpp.Rd
man/pedConvertCpp.Rd
man/genoConvert.Rd
man/homoZygotTest.Rd
man/homoZygotTestCpp.Rd
man/slidingRUNS.run.Rd
man/snpInRun.Rd
man/Froh_inbreeding.Rd
man/plot_Runs.Rd
man/summaryRuns.Rd
man/createRUNdf.Rd
man/chromosomeLength.Rd
man/plot_InbreedingChr.Rd
man/tableRuns.Rd
man/snpInRunCpp.Rd
man/findOppositeAndMissing.Rd
man/slidingWindow.Rd
build/vignette.rds
tests/testthat.R
tests/testthat/test_functions.R
tests/testthat/test_run.R
tests/testthat/test.ROHet.consecutive.csv
tests/testthat/test.map
tests/testthat/test.raw
tests/testthat/test.ROHet.sliding.csv
tests/testthat/test.ped
