API for divent
Entropy Partitioning to Measure Diversity
| Global functions | |
|---|---|
| S_v | Source code |
| abd_freq_count | Man page Source code |
| abd_species | Man page Source code |
| abd_sum | Man page Source code |
| abundances | Man page Source code |
| accum_div_phylo | Man page Source code |
| accum_div_phylo.abundances | Man page Source code |
| accum_div_phylo.numeric | Man page Source code |
| accum_ent_phylo | Man page Source code |
| accum_ent_phylo.abundances | Man page Source code |
| accum_ent_phylo.numeric | Man page Source code |
| accum_hill | Man page Source code |
| accum_hill.abundances | Man page Source code |
| accum_hill.numeric | Man page Source code |
| accum_mixing | Man page Source code |
| accum_sp | Man page |
| accum_sp_diversity | Man page |
| accum_sp_entropy | Man page |
| accum_sp_hill | Man page Source code |
| accum_sp_mixing | Man page |
| accum_sp_plot_helper | Source code |
| accum_sp_tsallis | Man page Source code |
| accum_tsallis | Man page Source code |
| accum_tsallis.abundances | Man page Source code |
| accum_tsallis.numeric | Man page Source code |
| alphahull | Man page Source code |
| as.double.species_distribution | Man page Source code |
| as.matrix.species_distribution | Man page Source code |
| as.numeric.species_distribution | Man page Source code |
| as_abundances | Man page Source code |
| as_abundances.character | Man page Source code |
| as_abundances.data.frame | Man page Source code |
| as_abundances.factor | Man page Source code |
| as_abundances.matrix | Man page Source code |
| as_abundances.numeric | Man page Source code |
| as_abundances.wmppp | Man page Source code |
| as_named_vector.character | Source code |
| as_named_vector.wmppp | Source code |
| as_phylo_divent | Man page Source code |
| as_probabilities | Man page Source code |
| as_probabilities.character | Man page Source code |
| as_probabilities.data.frame | Man page Source code |
| as_probabilities.factor | Man page Source code |
| as_probabilities.matrix | Man page Source code |
| as_probabilities.numeric | Man page Source code |
| as_probabilities.wmppp | Man page Source code |
| as_species_distribution | Man page Source code |
| as_species_distribution.character | Man page Source code |
| as_species_distribution.data.frame | Man page Source code |
| as_species_distribution.factor | Man page Source code |
| as_species_distribution.matrix | Man page Source code |
| as_species_distribution.numeric | Man page Source code |
| as_species_distribution.wmppp | Man page Source code |
| autoplot | Man page |
| autoplot.accum_sp | Man page Source code |
| autoplot.accumulation | Man page Source code |
| autoplot.profile | Man page Source code |
| autoplot.species_distribution | Man page Source code |
| autoplot.wmppp | Man page Source code |
| beta_solve | Source code |
| chao_A | Source code |
| chao_delta | Source code |
| check_divent_args | Man page Source code |
| checked_matrix | Source code |
| correction_fv | Source code |
| coverage | Man page Source code |
| coverage.abundances | Man page Source code |
| coverage.numeric | Man page Source code |
| coverage_to_size | Man page Source code |
| coverage_to_size.abundances | Man page Source code |
| coverage_to_size.numeric | Man page Source code |
| div.tibble | Source code |
| div_gen_simpson | Man page Source code |
| div_gen_simpson.numeric | Man page Source code |
| div_gen_simpson.species_distribution | Man page Source code |
| div_hill | Man page Source code |
| div_hill.numeric | Man page Source code |
| div_hill.species_distribution | Man page Source code |
| div_hurlbert | Man page Source code |
| div_hurlbert.numeric | Man page Source code |
| div_hurlbert.species_distribution | Man page Source code |
| div_part | Man page Source code |
| div_pd | Man page Source code |
| div_pd.numeric | Man page Source code |
| div_pd.species_distribution | Man page Source code |
| div_phylo | Man page Source code |
| div_phylo.numeric | Man page Source code |
| div_phylo.species_distribution | Man page Source code |
| div_richness | Man page Source code |
| div_richness.numeric | Man page Source code |
| div_richness.species_distribution | Man page Source code |
| div_similarity | Man page Source code |
| div_similarity.numeric | Man page Source code |
| div_similarity.species_distribution | Man page Source code |
| divent | Man page |
| divent-package | Man page |
| e_n_q | Man page Source code |
| ent.tibble | Source code |
| ent_allen | Man page Source code |
| ent_allen.numeric | Man page Source code |
| ent_allen.species_distribution | Man page Source code |
| ent_gamma_similarity | Source code |
| ent_gamma_tsallis | Source code |
| ent_gen_simpson | Man page Source code |
| ent_gen_simpson.numeric | Man page Source code |
| ent_gen_simpson.species_distribution | Man page Source code |
| ent_hurlbert | Man page Source code |
| ent_hurlbert.numeric | Man page Source code |
| ent_hurlbert.species_distribution | Man page Source code |
| ent_phylo | Man page Source code |
| ent_phylo.numeric | Man page Source code |
| ent_phylo.species_distribution | Man page Source code |
| ent_rao | Man page Source code |
| ent_rao.numeric | Man page Source code |
| ent_rao.species_distribution | Man page Source code |
| ent_shannon | Man page Source code |
| ent_shannon.numeric | Man page Source code |
| ent_shannon.species_distribution | Man page Source code |
| ent_similarity | Man page Source code |
| ent_similarity.numeric | Man page Source code |
| ent_similarity.species_distribution | Man page Source code |
| ent_simpson | Man page Source code |
| ent_simpson.numeric | Man page Source code |
| ent_simpson.species_distribution | Man page Source code |
| ent_sp_simpson | Man page Source code |
| ent_sp_simpsonEnvelope | Man page Source code |
| ent_tsallis | Man page Source code |
| ent_tsallis.numeric | Man page Source code |
| ent_tsallis.species_distribution | Man page Source code |
| error_message | Source code |
| estimate_prob_s_0 | Source code |
| exp_q | Man page Source code |
| fit_rac | Man page Source code |
| fit_rac.numeric | Man page Source code |
| fit_rac.species_distribution | Man page Source code |
| fun_ordinariness | Man page Source code |
| fun_similarity | Man page Source code |
| hurlbert_ent2div | Source code |
| is_abundances | Man page Source code |
| is_integer_values | Source code |
| is_phylo_divent | Man page Source code |
| is_probabilities | Man page Source code |
| is_species_distribution | Man page Source code |
| ln_q | Man page Source code |
| metacommunity | Man page Source code |
| metacommunity.abundances | Man page Source code |
| metacommunity.matrix | Man page Source code |
| mock_3sp | Man page |
| mock_3sp_abd | Man page |
| mock_3sp_dist | Man page |
| mock_3sp_tree | Man page |
| non_species_columns | Man page |
| paracou_6 | Man page |
| paracou_6_abd | Man page |
| paracou_6_fundist | Man page |
| paracou_6_taxo | Man page |
| paracou_6_wmppp | Man page |
| parallelCountNbd | Source code |
| phylo_abd | Source code |
| phylo_divent | Man page |
| phylo_entropy.phylo_abd | Source code |
| plot.accum_sp | Man page Source code |
| plot.phylo_divent | Man page Source code |
| plot.species_distribution | Man page Source code |
| plot_map | Man page Source code |
| prob_species | Man page Source code |
| probabilities | Man page Source code |
| probabilities.abundances | Man page Source code |
| probabilities.numeric | Man page Source code |
| profile_hill | Man page Source code |
| profile_hill.numeric | Man page Source code |
| profile_hill.species_distribution | Man page Source code |
| profile_phylo | Man page Source code |
| profile_phylo.numeric | Man page Source code |
| profile_phylo.species_distribution | Man page Source code |
| profile_similarity | Man page Source code |
| profile_similarity.numeric | Man page Source code |
| profile_similarity.species_distribution | Man page Source code |
| rarefaction_bias | Source code |
| rcommunity | Man page Source code |
| reexports | Man page |
| rlseries | Man page Source code |
| rspcommunity | Man page Source code |
| species_distribution | Man page Source code |
| theta_solve | Source code |
| tips | Source code |
