get_genes: Get the gene names from a differential network analysis
In dnapath: Differential Network Analysis using Gene Pathways
get_genes R Documentation
Get the gene names from a differential network analysis
Description
Get the gene names from a differential network analysis
Usage
get_genes(x)
Arguments
x
A 'dnapath_list' or 'dnapath' object from dnapath,
or a pathway list.
Value
Returns a vector containing all the genes in x.
See Also
rename_genes, entrez_to_symbol,
symbol_to_entrez
Examples
data(meso)
data(p53_pathways)
set.seed(0)
results <- dnapath(x = meso$gene_expression, pathway_list = p53_pathways,
group_labels = meso$groups, n_perm = 10)
genes <- get_genes(results)
dnapath documentation built on May 9, 2022, 9:05 a.m.
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| get_genes | R Documentation |
Get the gene names from a differential network analysis
Description
Get the gene names from a differential network analysis
Usage
get_genes(x)
Arguments
x |
A 'dnapath_list' or 'dnapath' object from |
Value
Returns a vector containing all the genes in x.
See Also
rename_genes, entrez_to_symbol,
symbol_to_entrez
Examples
data(meso)
data(p53_pathways)
set.seed(0)
results <- dnapath(x = meso$gene_expression, pathway_list = p53_pathways,
group_labels = meso$groups, n_perm = 10)
genes <- get_genes(results)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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