Description Usage Arguments Details Author(s) References See Also Examples
postkcluster
re-clusters the data with a user-specified number
of components, and displays the segmented image.
1 | postkcluster(mask, cx, clk=4, plot=TRUE)
|
mask |
masked full-sized image data prepared by |
cx |
data segmentation prepared by |
clk |
desired fixed number of components, including the background component, to use in the data segmentation; default clk=4: gray matter (GM), white matter (WM), CSF, and background |
plot |
logical variable; enables suspension of output images (default = TRUE) |
Partitioning clustering around medoids (PAM) is applied to the classes
simulated from dpmixsim
as a post-processing step.
This procedure may be applied to merge clusters, and reduce the number
of clusters to the specified value clk.
postkcluster
computes a clara
object using cluster
(see Struyf et.al.), a list representing a clustering of the data into
clk clusters.
Adelino Ferreira da Silva, Universidade Nova de Lisboa, Faculdade de Ciencias e Tecnologia, Portugal, afs@fct.unl.pt.
Adelino Ferreira da Silva, A Dirichlet process mixture model for brain MRI tissue classification, Medical Image Analysis 11 (2007) 169-182.
Adelino Ferreira da Silva, Bayesian mixture models of variable dimension for image segmentation, Comput. Methods Programs Biomed. 94 (2009) 1-14.
Anja Struyf, Mia Hubert & Peter J. Rousseeuw (1996): Clustering in an Object-Oriented Environment. Journal of Statistical Software, 1. http://www.stat.ucla.edu/journals/jss/
dpmixsim
,
readsliceimg
,
premask
,
postdpmixciz
,
postdataseg
,
postimgcomps
1 2 3 4 | ## Not run:
## see Examples in `dpmixsim'.
## End(Not run)
|
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