drLumi: Multiplex Immunoassays Data Analysis

Contains quality control routines for multiplex immunoassay data, including several approaches for: treating the background noise of the assay, fitting the dose-response curves and estimating the limits of quantification.

AuthorHector Sanz [aut, cre], John Aponte [aut], Jaroslaw Harezlak [aut], Yan Dong [aut], Magdalena Murawska [aut], Clarissa Valim [aut], Aintzane Ayestaran [ctb], Ruth Aguilar [ctb], Gemma Moncunill [ctb]
Date of publication2015-09-24 01:27:27
MaintainerHector Sanz <hector.sanz@isglobal.org>
LicenseGPL (>= 2)
Version0.1.2

View on CRAN

Files in this package

drLumi
drLumi/inst
drLumi/inst/tests
drLumi/inst/tests/report_interval_loq.R
drLumi/inst/tests/test-data_selection.R
drLumi/inst/tests/invest_decreasing.R
drLumi/inst/tests/test-loq_interval.R
drLumi/inst/NEWS
drLumi/inst/extdata
drLumi/inst/extdata/plate1.csv
drLumi/inst/extdata/bead_data.zip
drLumi/inst/extdata/bead_data
drLumi/inst/extdata/bead_data/plate_P1_A2.csv
drLumi/inst/extdata/bead_data/plate_P1_A1.csv
drLumi/inst/extdata/toydata.R
drLumi/inst/doc
drLumi/inst/doc/drLumi.R
drLumi/inst/doc/drLumi.rnw
drLumi/inst/doc/drLumi.pdf
drLumi/tests
drLumi/tests/test-all.R
drLumi/NAMESPACE
drLumi/data
drLumi/data/ecdata.rda
drLumi/data/mfidata.rda
drLumi/R
drLumi/R/lum_import_fluor.R drLumi/R/get_aic.R drLumi/R/avgimport.R drLumi/R/getPredict.R drLumi/R/invest.R drLumi/R/get_modelfit.R drLumi/R/get_fitted.R drLumi/R/plot.scluminex.R drLumi/R/scluminex.R drLumi/R/print.summary.scluminex.R drLumi/R/define_data.R drLumi/R/as.data.frame.summary.scluminex.R drLumi/R/data_selection.R drLumi/R/print.lum_export.R drLumi/R/invest.loq.interval.R drLumi/R/get_convergence.R drLumi/R/intra_icc.R drLumi/R/lum_import.default.R drLumi/R/summary.scluminex.R drLumi/R/mfidata.R drLumi/R/geom_mean.R drLumi/R/luminexData-internal.R drLumi/R/lum_import.R drLumi/R/est_conc.R drLumi/R/plotLum.R drLumi/R/derivative.R drLumi/R/get_neilltest.R drLumi/R/sampleimport.R drLumi/R/extractcoef.R drLumi/R/regionimport.R drLumi/R/print.scluminex.R drLumi/R/fix_name.R drLumi/R/invest.fun.R drLumi/R/conf_bands.R drLumi/R/get_outliers.R drLumi/R/summary.loq.R drLumi/R/loq_interval.R drLumi/R/print.loq.R drLumi/R/scurveimport.R drLumi/R/loq_derivatives.R drLumi/R/lum_import_bead.R drLumi/R/SSFunctions.R drLumi/R/batchimport.R drLumi/R/convert_time.R drLumi/R/bead_fun.R drLumi/R/get_rsq.R drLumi/R/compair.R drLumi/R/wellsimport.R drLumi/R/plotRes.R drLumi/R/ecdata.R drLumi/R/print.lum_import.R drLumi/R/plotQQnorm.R drLumi/R/as.data.frame.scluminex.R drLumi/R/loq_cv.R drLumi/R/lum_export.R
drLumi/vignettes
drLumi/vignettes/unnamed-chunk-35.pdf
drLumi/vignettes/flow.pdf
drLumi/vignettes/drLumi_vignette.bib
drLumi/vignettes/unnamed-chunk-19.pdf
drLumi/vignettes/unnamed-chunk-26-1.pdf
drLumi/vignettes/unnamed-chunk-34.pdf
drLumi/vignettes/qqplot.pdf
drLumi/vignettes/unnamed-chunk-36.pdf
drLumi/vignettes/loqder.pdf
drLumi/vignettes/unnamed-chunk-5.tex
drLumi/vignettes/unnamed-chunk-57-1.pdf
drLumi/vignettes/drLumi.rnw
drLumi/vignettes/resplot.pdf
drLumi/vignettes/unnamed-chunk-54-1.pdf
drLumi/vignettes/unnamed-chunk-38.pdf
drLumi/vignettes/unnamed-chunk-14.pdf
drLumi/vignettes/unnamed-chunk-37.pdf
drLumi/vignettes/unnamed-chunk-52-1.pdf
drLumi/vignettes/unnamed-chunk-13.pdf
drLumi/vignettes/comparisonbackground.pdf
drLumi/vignettes/flow.tex
drLumi/vignettes/scurveplot.pdf
drLumi/vignettes/unnamed-chunk-12.pdf
drLumi/vignettes/backcomparison.pdf
drLumi/vignettes/flow.synctex.gz
drLumi/vignettes/test.vrb
drLumi/vignettes/unnamed-chunk-18.pdf
drLumi/vignettes/unnamed-chunk-33.pdf
drLumi/vignettes/framed.sty
drLumi/MD5
drLumi/build
drLumi/build/vignette.rds
drLumi/DESCRIPTION
drLumi/man
drLumi/man/est_conc.Rd drLumi/man/mfidata.Rd drLumi/man/plot.scluminex.Rd drLumi/man/invest.Rd drLumi/man/SSl5cons.Rd drLumi/man/ecdata.Rd drLumi/man/data_selection.Rd drLumi/man/lum_export.Rd drLumi/man/SSl4.Rd drLumi/man/loq_derivatives.Rd drLumi/man/get_outliers.Rd drLumi/man/conf_bands.Rd drLumi/man/SSexp.Rd drLumi/man/loq_interval.Rd drLumi/man/lum_import.Rd drLumi/man/SSl4cons.Rd drLumi/man/scluminex.Rd drLumi/man/SSexpcons.Rd drLumi/man/SSl5.Rd drLumi/man/summary.scluminex.Rd drLumi/man/loq_cv.Rd drLumi/man/intra_icc.Rd

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