Nothing
# Tests "bcaRel" function
test_that("bcaRel", {
# T1 tt must be a matrix
tt1<- c(1,0,1,1)
spec1 <- matrix(c(1,1,1,2,0.75,0.75,0.75,0.25), ncol = 2, dimnames = list(NULL, c("specnb", "mass")))
info1 =matrix(c(4,5,2,2), ncol = 2, dimnames = list(NULL, c("varnb", "size")) )
expect_error(bcaRel(tt = tt1, spec = spec1, infovar = info1) , "tt parameter must be a \\(0,1\\) or logical matrix.")
#
# T2 spec must be a matrix
tt2 <- matrix(c(0,1,1,0,1,0,1,0,1,0,0,1,1,1,1,1),nrow=4, byrow = TRUE, dimnames =list(NULL, c("rWdy", "rWdn", "Ry", "Rn")) )
spec2 <- c(1,1,1,2)
expect_error(bcaRel(tt = tt2, spec = spec2, infovar = info1) , "spec parameter must be a 2 columns matrix.")
#
# T3 infovar must be a matrix
info3 =c(2,2)
expect_error(bcaRel(tt = tt2, spec = spec1, infovar = info3) , "infovar parameter must be a 2 column numerical matrix with variables numbers in fist column and with sum of 2nd column = ncol\\(tt\\).")
#
# T4: nrow(tt) must equal nrow(spec)
spec2 <- matrix(c(1,1,2,0.75,0.75,0.25), ncol = 2, dimnames = list(NULL, c("specnb", "mass")))
expect_error(bcaRel(tt = tt2, spec = spec2, infovar = info1) ,"Error in input arguments: check your input data.")
#
# T5: sum of masses must equal 1
spec3 <- matrix(c(1,1,1,2,0.75,0.75,75,0.2), ncol = 2, dimnames = list(NULL, c("specnb", "mass")))
expect_error(bcaRel(tt = tt2, spec = spec3, infovar = info1, varnames = c("W", "R" )) ,"Sum of masses not equal to 1 : check your data.")
#
# T6: varnames argument missing
expect_error(bcaRel(tt = tt2, spec = spec1, infovar = info1) ,"varnames argument missing.")
#
# T7: Result is of class "bcaspec"
result <- bcaRel(tt = tt2, spec = spec1, infovar = info1, varnames = c("W", "R" ))
expect_is(result, "bcaspec")
#
# T8: check for column names
tt3 <- matrix(c(0,1,1,0,1,0,1,0,1,0,0,1,1,1,1,1),nrow=4, byrow = TRUE )
expect_error(bcaRel(tt = tt3, spec = spec1, infovar = info1), "Column names of tt matrix are missing.")
#
# T9: check for last row of tt matrix
tt <- matrix(c(0,1,0,1,0,1,
0,1,0,1,1,0,
1,0,1,0,0,1,
0,1,1,0,0,1,
1,0,0,1,0,1), nrow = 2 + 3, ncol = 6, dimnames = list(NULL,c("a1 no", "a1 yes", "a2 no", "a2 yes", "b no", "b yes")))
spec <- matrix(c(1,1,1,1,1,1,1,1,1,1), nrow = 5, ncol = 2)
infovar <- matrix(c(1,2,3,2,2,2), nrow = 3, ncol = 2)
varnames <- c("a1","a2","b")
expect_error( bcaRel(tt,spec,infovar,varnames), "The last row of parameter tt must be a row of ones.")
#
# T10. Variables names must start with a letter
tt <- matrix(c(1,0,0,1,0,0,
0,1,0,0,1,0,
0,0,1,0,0,1,
rep(1,6)), ncol = 6, byrow = TRUE, dimnames = list(NULL, c("a", "b", "c", "x", "y", "z")))
spec <- matrix(c(1,2,3,4,0.2,0.3,0.5,0), ncol = 2, dimnames = list(NULL, c("specnb", "mass")))
inforvar <- matrix(c(1,3,3,3), ncol = 2, dimnames = list(NULL, c("varnb", "size")) )
expect_error(bcaRel(tt = tt, spec = spec, infovar = inforvar, varnames = c(1, 3), relnb = 1), "Names of variables must start with a letter." )
#
})
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