dtwclust: Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance

Share:

Time series clustering along with optimized techniques related to the Dynamic Time Warping distance and its corresponding lower bounds. Implementations of partitional, hierarchical, fuzzy, k-Shape and TADPole clustering are available. Functionality can be easily extended with custom distance measures and centroid definitions.

Author
Alexis Sarda-Espinosa
Date of publication
2016-12-01 11:28:36
Maintainer
Alexis Sarda <alexis.sarda@gmail.com>
License
GPL-3
Version
3.0.0
URLs

View on CRAN

Man pages

as.matrix
as.matrix
clusterSim
Cluster Similarity Matrix
create_dtwclust
Create formal 'dtwclust' objects
cvi
Cluster validity indices
DBA
DTW Barycenter Averaging
dtw2
DTW distance with L2 norm
dtw_basic
Basic DTW distance
dtwclust
Time series clustering
dtwclust-class
Class definition for 'dtwclust'
dtwclustControl-class
Class definition for 'dtwclustControl'
dtwclustFamily-class
Class definition for 'dtwclustFamily'
dtwclust-methods
Methods for 'dtwclust'
dtwclust-package
Time series clustering along with optimizations for the...
dtw_lb
DTW distance matrix guided by Lemire's improved lower bound
GAK
Fast global alignment kernels
lb_improved
Lemire's improved DTW lower bound
lb_keogh
Keogh's DTW lower bound
NCCc
Cross-correlation with coefficient normalization
randIndex
Compare partitions
reinterpolate
Wrapper for simple linear reinterpolation
SBD
Shape-based distance
shape_extraction
Shape average of several time series
TADPole
TADPole clustering
uciCT
Subset of character trajectories data set
zscore
Wrapper for z-normalization

Files in this package

dtwclust
dtwclust/inst
dtwclust/inst/NEWS.Rd
dtwclust/inst/dtwclust-examples.R
dtwclust/inst/doc
dtwclust/inst/doc/dtwclust.pdf
dtwclust/inst/doc/dtwclust.Rnw
dtwclust/tests
dtwclust/tests/testthat.R
dtwclust/tests/testthat
dtwclust/tests/testthat/unit
dtwclust/tests/testthat/unit/cvis.R
dtwclust/tests/testthat/unit/methods.R
dtwclust/tests/testthat/unit/distances.R
dtwclust/tests/testthat/unit/centroids.R
dtwclust/tests/testthat/test-01-unit.R
dtwclust/tests/testthat/integration
dtwclust/tests/testthat/integration/custom-dist.R
dtwclust/tests/testthat/integration/families.R
dtwclust/tests/testthat/integration/proxy.R
dtwclust/tests/testthat/test-06-parallel.R
dtwclust/tests/testthat/test-04-system.R
dtwclust/tests/testthat/regression
dtwclust/tests/testthat/regression/family-distmat.R
dtwclust/tests/testthat/regression/dtwb.R
dtwclust/tests/testthat/regression/custom-dist.R
dtwclust/tests/testthat/regression/cvis.R
dtwclust/tests/testthat/regression/methods.R
dtwclust/tests/testthat/regression/proxy.R
dtwclust/tests/testthat/regression/family-centroids.R
dtwclust/tests/testthat/regression/clusterings.R
dtwclust/tests/testthat/acceptance
dtwclust/tests/testthat/acceptance/dtwb.R
dtwclust/tests/testthat/acceptance/lbs.R
dtwclust/tests/testthat/acceptance/gak.R
dtwclust/tests/testthat/test-05-regression.R
dtwclust/tests/testthat/helper-all.R
dtwclust/tests/testthat/test-03-acceptance.R
dtwclust/tests/testthat/test-02-integration.R
dtwclust/tests/testthat/system
dtwclust/tests/testthat/system/partitional.R
dtwclust/tests/testthat/system/data-formats.R
dtwclust/tests/testthat/system/hierarchical.R
dtwclust/tests/testthat/system/fuzzy.R
dtwclust/tests/testthat/system/preproc.R
dtwclust/tests/testthat/system/invalid-inputs.R
dtwclust/src
dtwclust/src/dtw-basic.c
dtwclust/src/pairs.c
dtwclust/src/logGAK.c
dtwclust/src/envelop.cpp
dtwclust/NAMESPACE
dtwclust/data
dtwclust/data/uciCT.rda
dtwclust/R
dtwclust/R/uciCT.R
dtwclust/R/all-cent.R
dtwclust/R/lb-improved.R
dtwclust/R/utils.R
dtwclust/R/shape-extraction.R
dtwclust/R/zscore.R
dtwclust/R/partitional.R
dtwclust/R/reinterpolate.R
dtwclust/R/pkg.R
dtwclust/R/dtw-basic.R
dtwclust/R/SBD.R
dtwclust/R/GAK.R
dtwclust/R/dtw2.R
dtwclust/R/ddist.R
dtwclust/R/fuzzy.R
dtwclust/R/dtwclust.R
dtwclust/R/DBA.R
dtwclust/R/dtwclust-classes.R
dtwclust/R/NCCc.R
dtwclust/R/create-dtwclust.R
dtwclust/R/lb-keogh.R
dtwclust/R/dtw-lb.R
dtwclust/R/cvi.R
dtwclust/R/TADPole.R
dtwclust/R/dtwclust-methods.R
dtwclust/vignettes
dtwclust/vignettes/REFERENCES.bib
dtwclust/vignettes/dtwclust.Rnw
dtwclust/MD5
dtwclust/build
dtwclust/build/vignette.rds
dtwclust/DESCRIPTION
dtwclust/man
dtwclust/man/dtw_basic.Rd
dtwclust/man/lb_keogh.Rd
dtwclust/man/dtwclustControl-class.Rd
dtwclust/man/NCCc.Rd
dtwclust/man/dtw_lb.Rd
dtwclust/man/zscore.Rd
dtwclust/man/DBA.Rd
dtwclust/man/clusterSim.Rd
dtwclust/man/dtw2.Rd
dtwclust/man/create_dtwclust.Rd
dtwclust/man/TADPole.Rd
dtwclust/man/dtwclust-methods.Rd
dtwclust/man/cvi.Rd
dtwclust/man/reinterpolate.Rd
dtwclust/man/lb_improved.Rd
dtwclust/man/dtwclust-package.Rd
dtwclust/man/dtwclustFamily-class.Rd
dtwclust/man/SBD.Rd
dtwclust/man/as.matrix.Rd
dtwclust/man/dtwclust-class.Rd
dtwclust/man/shape_extraction.Rd
dtwclust/man/GAK.Rd
dtwclust/man/dtwclust.Rd
dtwclust/man/uciCT.Rd
dtwclust/man/randIndex.Rd