Time series clustering along with optimized techniques related to the Dynamic Time Warping distance and its corresponding lower bounds. Implementations of partitional, hierarchical, fuzzy, k-Shape and TADPole clustering are available. Functionality can be easily extended with custom distance measures and centroid definitions.

Author | Alexis Sarda-Espinosa |

Date of publication | 2017-01-08 11:20:09 |

Maintainer | Alexis Sarda <alexis.sarda@gmail.com> |

License | GPL-3 |

Version | 3.1.0 |

https://github.com/asardaes/dtwclust |

**as.matrix:** as.matrix

**clusterSim:** Cluster Similarity Matrix

**compute_envelop:** Time series warping envelops

**create_dtwclust:** Create formal 'dtwclust' objects

**cvi:** Cluster validity indices

**DBA:** DTW Barycenter Averaging

**dtw2:** DTW distance with L2 norm

**dtw_basic:** Basic DTW distance

**dtwclust:** Time series clustering

**dtwclust-class:** Class definition for 'dtwclust'

**dtwclustControl-class:** Class definition for 'dtwclustControl'

**dtwclustFamily-class:** Class definition for 'dtwclustFamily'

**dtwclust-methods:** Methods for 'dtwclust'

**dtwclust-package:** Time series clustering along with optimizations for the...

**dtw_lb:** DTW distance matrix guided by Lemire's improved lower bound

**GAK:** Fast global alignment kernels

**lb_improved:** Lemire's improved DTW lower bound

**lb_keogh:** Keogh's DTW lower bound

**NCCc:** Cross-correlation with coefficient normalization

**randIndex:** Compare partitions

**reinterpolate:** Wrapper for simple linear reinterpolation

**SBD:** Shape-based distance

**shape_extraction:** Shape average of several time series

**TADPole:** TADPole clustering

**uciCT:** Subset of character trajectories data set

**zscore:** Wrapper for z-normalization

dtwclust

dtwclust/inst

dtwclust/inst/NEWS.Rd

dtwclust/inst/dtwclust-examples.R

dtwclust/inst/doc

dtwclust/inst/doc/dtwclust.pdf

dtwclust/inst/doc/dtwclust.Rnw

dtwclust/tests

dtwclust/tests/testthat.R

dtwclust/tests/testthat

dtwclust/tests/testthat/unit

dtwclust/tests/testthat/unit/cvis.R

dtwclust/tests/testthat/unit/methods.R

dtwclust/tests/testthat/unit/distances.R

dtwclust/tests/testthat/unit/centroids.R

dtwclust/tests/testthat/test-01-unit.R

dtwclust/tests/testthat/integration

dtwclust/tests/testthat/integration/custom-dist.R

dtwclust/tests/testthat/integration/families.R

dtwclust/tests/testthat/integration/proxy.R

dtwclust/tests/testthat/test-06-parallel.R

dtwclust/tests/testthat/test-04-system.R

dtwclust/tests/testthat/regression

dtwclust/tests/testthat/regression/family-distmat.R

dtwclust/tests/testthat/regression/dtwb.R

dtwclust/tests/testthat/regression/custom-dist.R

dtwclust/tests/testthat/regression/cvis.R

dtwclust/tests/testthat/regression/methods.R

dtwclust/tests/testthat/regression/proxy.R

dtwclust/tests/testthat/regression/family-centroids.R

dtwclust/tests/testthat/regression/clusterings.R

dtwclust/tests/testthat/acceptance

dtwclust/tests/testthat/acceptance/dtwb.R

dtwclust/tests/testthat/acceptance/lbs.R

dtwclust/tests/testthat/acceptance/gak.R

dtwclust/tests/testthat/test-05-regression.R

dtwclust/tests/testthat/helper-all.R

dtwclust/tests/testthat/test-03-acceptance.R

dtwclust/tests/testthat/test-02-integration.R

dtwclust/tests/testthat/system

dtwclust/tests/testthat/system/partitional.R

dtwclust/tests/testthat/system/data-formats.R

dtwclust/tests/testthat/system/hierarchical.R

dtwclust/tests/testthat/system/fuzzy.R

dtwclust/tests/testthat/system/preproc.R

dtwclust/tests/testthat/system/invalid-inputs.R

dtwclust/src

dtwclust/src/dtw-basic.c

dtwclust/src/pairs.c

dtwclust/src/logGAK.c

dtwclust/src/envelop.cpp

dtwclust/NAMESPACE

dtwclust/data

dtwclust/data/uciCT.rda

dtwclust/R

dtwclust/R/uciCT.R
dtwclust/R/all-cent.R
dtwclust/R/lb-improved.R
dtwclust/R/utils.R
dtwclust/R/compute-envelop.R
dtwclust/R/shape-extraction.R
dtwclust/R/zscore.R
dtwclust/R/partitional.R
dtwclust/R/reinterpolate.R
dtwclust/R/pkg.R
dtwclust/R/dtw-basic.R
dtwclust/R/SBD.R
dtwclust/R/GAK.R
dtwclust/R/dtw2.R
dtwclust/R/ddist.R
dtwclust/R/fuzzy.R
dtwclust/R/dtwclust.R
dtwclust/R/DBA.R
dtwclust/R/dtwclust-classes.R
dtwclust/R/NCCc.R
dtwclust/R/create-dtwclust.R
dtwclust/R/lb-keogh.R
dtwclust/R/dtw-lb.R
dtwclust/R/cvi.R
dtwclust/R/TADPole.R
dtwclust/R/dtwclust-methods.R
dtwclust/vignettes

dtwclust/vignettes/REFERENCES.bib

dtwclust/vignettes/dtwclust.Rnw

dtwclust/MD5

dtwclust/build

dtwclust/build/vignette.rds

dtwclust/DESCRIPTION

dtwclust/man

dtwclust/man/dtw_basic.Rd
dtwclust/man/lb_keogh.Rd
dtwclust/man/dtwclustControl-class.Rd
dtwclust/man/NCCc.Rd
dtwclust/man/compute_envelop.Rd
dtwclust/man/dtw_lb.Rd
dtwclust/man/zscore.Rd
dtwclust/man/DBA.Rd
dtwclust/man/clusterSim.Rd
dtwclust/man/dtw2.Rd
dtwclust/man/create_dtwclust.Rd
dtwclust/man/TADPole.Rd
dtwclust/man/dtwclust-methods.Rd
dtwclust/man/cvi.Rd
dtwclust/man/reinterpolate.Rd
dtwclust/man/lb_improved.Rd
dtwclust/man/dtwclust-package.Rd
dtwclust/man/dtwclustFamily-class.Rd
dtwclust/man/SBD.Rd
dtwclust/man/as.matrix.Rd
dtwclust/man/dtwclust-class.Rd
dtwclust/man/shape_extraction.Rd
dtwclust/man/GAK.Rd
dtwclust/man/dtwclust.Rd
dtwclust/man/uciCT.Rd
dtwclust/man/randIndex.Rd
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