Files in dynamichazard
Dynamic Hazard Models using State Space Models

MD5

NAMESPACE

DESCRIPTION

R/RcppExports.R R/shiny_app.R R/options.R R/sims.R R/hatvalues.R R/print.R R/summary.R R/risk_obj.R R/ddhazard.R R/predict.R R/get_design_matrix.R R/loglike.R R/roxygen_tags.R R/plot.R R/static_glm.R R/HDs.R R/residuals.R R/boot_est.R R/utils.R R/PF.R

src/parallel_qr.cpp

src/Makevars.win

src/Makevars

src/parallel_glm.cpp

src/thread_pool.h

src/RcppExports.cpp

src/PF_fixed_effects.cpp

src/estimate_fixed_effects_M_step.cpp

src/ddhazard.h

src/ddhazard_fit.cpp

src/for_tests.cpp

src/risk_obj.cpp

src/problem_data.h

src/arma_n_rcpp.h

src/sample_funcs.h

src/utils.cpp

src/loglike.cpp

src/Rconfig-wrap.h

src/utils.h

src/family.cpp

src/lin_maps.cpp

src/parallel_qr.h

src/sample_funcs.cpp

src/estimate_fixed_effects_M_step.h

src/bigglm_wrapper.cpp

src/lin_maps.h

src/thread_pool.cpp

src/family.h

src/PF.cpp

src/bigglm_wrapper.h

src/R_BLAS_LAPACK.h

src/arma_BLAS_LAPACK.h

src/biglm/boundedQRf.f

src/PF/PF_score_n_Hess.cpp

src/PF/est_params_RW.cpp

src/PF/cond_approx.cpp

src/PF/PF_logger.cpp

src/PF/importance_samplers.cpp

src/PF/r_to_cpp_clouds_n_reverse.cpp

src/PF/dmvnrm.cpp

src/PF/particles.h

src/PF/PFs.cpp

src/PF/resamplers.h

src/PF/est_params_dens.cpp

src/PF/get_work_blocks.h

src/PF/PF_utils.cpp

src/PF/cond_approx.h

src/PF/densities.h

src/PF/PF_data.h

src/PF/smoother_output.cpp

src/PF/dists.h

src/PF/importance_samplers.h

src/PF/PF_utils.h

src/PF/dmvnrm.h

src/PF/est_params.h

src/PF/particles.cpp

src/PF/densities.cpp

src/PF/PFs.h

src/PF/dists.cpp

src/PF/covarmat.cpp

src/PF/covarmat.h

src/PF/resamplers.cpp

src/ddhazard/GMA_solver.cpp

src/ddhazard/EKF_solver.cpp

src/ddhazard/SMA_solver.cpp

src/ddhazard/UKF_solver.cpp

src/BLAS_LAPACK/R_BLAS_LAPACK.cpp

src/BLAS_LAPACK/arma_BLAS_LAPACK.cpp

src/BLAS_LAPACK/dchur.f

inst/CITATION

inst/doc/Bootstrap_illustration.pdf inst/doc/ddhazard.R inst/doc/Diagnostics.R inst/doc/Particle_filtering.pdf

inst/doc/ddhazard.Rnw

inst/doc/Diagnostics.pdf

inst/doc/Particle_filtering.pdf.asis

inst/doc/Comparing_methods_for_logistic_models.R inst/doc/ddhazard.pdf inst/doc/Diagnostics.Rmd inst/doc/Comparing_methods_for_logistic_models.pdf

inst/doc/Bootstrap_illustration.pdf.asis

inst/doc/Comparing_methods_for_logistic_models.Rmd inst/shiny/app.R

build/vignette.rds

tests/testthat.R

tests/testthat/VAR_data.RDS

tests/testthat/VAR_restrict_vs_non_data.RDS

tests/testthat/test_LAPACK_BLAS.R

tests/testthat/whas500.RData

tests/testthat/helper.R tests/testthat/test_predict.R tests/testthat/test_hatvalues.R

tests/testthat/Rossi.RData

tests/testthat/test_PF.R

tests/testthat/ddsurvcurve-fix-cont.RDS

tests/testthat/test_cpp_sample_funcs.R tests/testthat/test_boot_est.R

tests/testthat/binary.csv

tests/testthat/test_cloglog.R tests/testthat/test_static_glm.R tests/testthat/test_design_mat_and_risk_obj.R tests/testthat/test_SMA.R

tests/testthat/previous_results/E_step_fixed_pbc.RDS

tests/testthat/previous_results/fixed_terms_UKF.RDS

tests/testthat/previous_results/summary_ddhazard_one_coef_print

tests/testthat/previous_results/space_error_print

tests/testthat/previous_results/ddhazard_exp_clip.RDS

tests/testthat/previous_results/ddhazard_help_page_order_two.RDS

tests/testthat/previous_results/pf_t_dist_proposal.RDS

tests/testthat/previous_results/posterior_approx_logit_pbc.RDS

tests/testthat/previous_results/summary_ddhazard_print

tests/testthat/previous_results/cloglog-sim-ekf-1-it.RDS

tests/testthat/previous_results/boot_print

tests/testthat/previous_results/PF_get_score_n_hess-help-res.RDS

tests/testthat/previous_results/ddhazard_help_page_predict_response.RDS

tests/testthat/previous_results/bootstrap_filter_cloud_means.RDS

tests/testthat/previous_results/AUX_normal_approx_w_particles_cloud_means.RDS

tests/testthat/previous_results/boot1.RDS

tests/testthat/previous_results/PF_EM_print

tests/testthat/previous_results/hatvalues_help_page.RDS

tests/testthat/previous_results/cloglog-preds.RDS

tests/testthat/previous_results/UKF4.RDS

tests/testthat/previous_results/posterior_approx_logit_pbc_large_by.RDS

tests/testthat/previous_results/Rossi_pearson.RDS

tests/testthat/previous_results/get_survival_case_weights_and_data_help_page_1.RDS

tests/testthat/previous_results/summary_ddhazard_one_digit_print

tests/testthat/previous_results/summary_ddhazard_all_coef_print

tests/testthat/previous_results/fixed_terms1.RDS

tests/testthat/previous_results/E_step_sim_exp_UKF.RDS

tests/testthat/previous_results/UKF2.RDS

tests/testthat/previous_results/n_smooth_final_RW.RDS

tests/testthat/previous_results/boot_print_w_o_fixed

tests/testthat/previous_results/fixed_terms_UKF_exp.RDS

tests/testthat/previous_results/ddhazard_exp_sim_data.RDS

tests/testthat/previous_results/posterior_approx_exp_pbc.RDS

tests/testthat/previous_results/Brier_AUX_normal_w_particles_cloud_means.RDS

tests/testthat/previous_results/ddhazard_help_page_predict_term.RDS

tests/testthat/previous_results/survival_lung_example_cloud_means.RDS

tests/testthat/previous_results/print_ddhazard

tests/testthat/previous_results/get_risk_obj_help_page.RDS

tests/testthat/previous_results/summary_ddhazard_fixed_print

tests/testthat/previous_results/PF_mean_2D.RDS

tests/testthat/previous_results/hats_dym_Rossi.RDS

tests/testthat/previous_results/PF_get_score_n_hess-help-res-O_N_sq-old.RDS

tests/testthat/previous_results/sim_exp.RDS

tests/testthat/previous_results/Rossi_state.RDS

tests/testthat/previous_results/util_sim_exp.RDS

tests/testthat/previous_results/fixed_terms_pbc.RDS

tests/testthat/previous_results/ddhazard_help_page_residuals.RDS

tests/testthat/previous_results/E_step_sim_UKF.RDS

tests/testthat/previous_results/hats_dym_n_fixed_whas500.RDS

tests/testthat/previous_results/GMA_pbc_fixed_M_step.RDS

tests/testthat/previous_results/static1.RDS

tests/testthat/previous_results/std_space_error_print

tests/testthat/previous_results/print_ddhazard_UKF

tests/testthat/previous_results/UKF1.RDS

tests/testthat/previous_results/static_glm_help_page.RDS

tests/testthat/previous_results/summary_ddhazard_exp_print

tests/testthat/previous_results/ddhazard_exp_clip_w_jump.RDS

tests/testthat/previous_results/boot2.RDS

tests/testthat/previous_results/summary_ddhazard_one_digit_object.RDS

tests/testthat/previous_results/head_neck_exp.RDS

tests/testthat/previous_results/ddsurvcurve-fix-disc-1.RDS

tests/testthat/previous_results/GMA_pbc_o1_exp.RDS

tests/testthat/previous_results/PF_quantile_2D.RDS

tests/testthat/previous_results/cloglog-sim-gma.RDS

tests/testthat/previous_results/PF_normal_approx_w_cloud_mean_cloud_means.RDS

tests/testthat/previous_results/PF_get_score_n_hess-help-res-old.RDS

tests/testthat/previous_results/get_survival_case_weights_and_data_help_page_2.RDS

tests/testthat/previous_results/boot4.RDS

tests/testthat/previous_results/hats_dym_n_fixed_Rossi.RDS

tests/testthat/previous_results/PF_clouds_print

tests/testthat/previous_results/GMA_pbc_o2_logit.RDS

tests/testthat/previous_results/summary_ddhazard_one_coef_object.RDS

tests/testthat/previous_results/PF_VARS_non_zero_mean_slope.RDS

tests/testthat/previous_results/posterior_approx_logit_fixed_M.RDS

tests/testthat/previous_results/E_step_fixed_exp_head_neck.RDS

tests/testthat/previous_results/hats_dym_whas500.RDS

tests/testthat/previous_results/ddhazard_help_page_order_one.RDS

tests/testthat/previous_results/boot_posterior_approx.RDS

tests/testthat/previous_results/util_sim_logit.RDS

tests/testthat/previous_results/PF_normal_approx_w_particles_cloud_means.RDS

tests/testthat/previous_results/GMA_head_neck_cancer_o1.RDS

tests/testthat/previous_results/PF_get_score_n_hess-help-res-O_N_sq.RDS

tests/testthat/previous_results/fixed_terms_UKF_exp_E_step.RDS

tests/testthat/previous_results/n_smooth_final_VAR.RDS

tests/testthat/previous_results/GMA_pbc_fixed_E_step.RDS

tests/testthat/previous_results/ddhazard_help_page_loglike.RDS

tests/testthat/previous_results/posterior_approx_logit_2_order.RDS

tests/testthat/previous_results/summary_ddhazard_UKF_object.RDS

tests/testthat/previous_results/whas_state.RDS

tests/testthat/previous_results/ddhazard_boot_help_page.RDS

tests/testthat/previous_results/pearson.RDS

tests/testthat/previous_results/ddsurvcurve-fix-cont.RDS

tests/testthat/previous_results/PF_VARS.RDS

tests/testthat/previous_results/E_step_sim_EKF_order_two.RDS

tests/testthat/previous_results/PF_head_neck_cloud_means.RDS

tests/testthat/previous_results/GMA_pbc_o2_logit_lower_LR.RDS

tests/testthat/previous_results/PF_VARS_non_zero_mean_inter.RDS

tests/testthat/previous_results/summary_ddhazard_all_coef_object.RDS

tests/testthat/previous_results/posterior_approx_logit_fixed_E.RDS

tests/testthat/previous_results/PF_head_neck_w_Brier_method_cloud_means.RDS

tests/testthat/previous_results/UKF_exp_head_neck.RDS

tests/testthat/previous_results/ddhazard_head_neck.RDS

tests/testthat/previous_results/boot3.RDS

tests/testthat/previous_results/E_step_fixed_head_neck.RDS

tests/testthat/previous_results/summary_ddhazard_UKF_print

tests/testthat/previous_results/print-ddsurvcurve

tests/testthat/previous_results/summary_ddhazard_fixed_object.RDS

tests/testthat/previous_results/cloglog-sim-ekf-more-it.RDS

tests/testthat/previous_results/E_step_sim_exp_UKF_order_two.RDS

tests/testthat/previous_results/AUX_normal_approx_w_cloud_mean_cloud_means.RDS

tests/testthat/previous_results/ddsurvcurve-fix-disc-2.RDS

tests/testthat/previous_results/whas_pearson.RDS

tests/testthat/previous_results/summary_ddhazard_exp_object.RDS

tests/testthat/previous_results/summary_ddhazard_object.RDS

tests/testthat/previous_results/print_ddhazard_exp

vignettes/ddbib.bib

vignettes/bibliography.bib

vignettes/ddhazard.Rnw

vignettes/bib_style.csl

vignettes/Particle_filtering.pdf.asis

vignettes/Diagnostics.Rmd

vignettes/Bootstrap_illustration.pdf.asis

vignettes/Comparing_methods_for_logistic_models.Rmd

vignettes/Diagnostics/whas500.RData

vignettes/Diagnostics/Rossi.RData

data/hds.rda

man/get_cloud_means.Rd man/hds.Rd man/plot.PF_EM.Rd man/PF_forward_filter.Rd man/PF_get_score_n_hess.Rd man/ddhazard_control.Rd man/PF_EM.Rd man/summary.ddhazard.Rd man/get_risk_obj.Rd man/plot.ddhazard_space_errors.Rd man/logLik.ddhazard.Rd man/get_cloud_quantiles.Rd man/residuals.ddhazard.Rd man/plot.PF_clouds.Rd man/ddhazard_app.Rd man/print.ddhazard_boot.Rd man/ddhazard_boot.Rd man/plot.ddhazard.Rd man/get_survival_case_weights_and_data.Rd man/ddFixed.Rd man/static_glm.Rd man/get_Q_0.Rd man/PF_control.Rd man/logLik.PF_EM.Rd man/ddhazard.Rd man/predict.ddhazard.Rd man/hatvalues.ddhazard.Rd man/ddsurvcurve.Rd

dynamichazard documentation built on Oct. 6, 2022, 1:08 a.m.

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dynamichazard
Dynamic Hazard Models using State Space Models

Files in dynamichazard
Dynamic Hazard Models using State Space Models

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dynamichazard Dynamic Hazard Models using State Space Models

Files in dynamichazard Dynamic Hazard Models using State Space Models

R Package Documentation

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dynamichazard
Dynamic Hazard Models using State Space Models

Files in dynamichazard
Dynamic Hazard Models using State Space Models