Dynamic Modeling in R

autoplot.dynrTaste | The ggplot of the outliers estimates. |

coef.dynrCook | Extract fitted parameters from a dynrCook Object |

confint.dynrCook | Confidence Intervals for Model Parameters |

diag-character-method | Create a diagonal matrix from a character vector |

dynr.cook | Cook a dynr model to estimate its free parameters |

dynrCook-class | The dynrCook Class |

dynr.data | Create a list of data for parameter estimation (cooking dynr)... |

dynrDynamics-class | The dynrDynamics Class |

dynr.flowField | A Function to plot the flow or velocity field for a one or... |

dynr.ggplot | The ggplot of the smoothed state estimates and the most... |

dynrInitial-class | The dynrInitial Class |

dynr.ldl | LDL Decomposition for Matrices |

dynrMeasurement-class | The dynrMeasurement Class |

dynr.mi | Multiple Imputation of dynrModel objects |

dynr.model | Create a dynrModel object for parameter estimation (cooking... |

dynrModel-class | The dynrModel Class |

dynrNoise-class | The dynrNoise Class |

dynr-package | Dynamic Modeling in R |

dynr.plotFreq | Plot of the estimated frequencies of the regimes across all... |

dynrRecipe-class | The dynrRecipe Class |

dynrRegimes-class | The dynrRegimes Class |

dynr.taste | Detect outliers in state space models. |

dynr.taste2 | Re-fit state-space model using the estimated outliers. |

dynr.trajectory | A Function to perform numerical integration of the chosen ODE... |

dynrTrans-class | The dynrTrans Class |

dynr.version | Current Version String |

EMG | Single-subject time series of facial electromyography data |

EMGsim | Simulated single-subject time series to capture features of... |

getdx | A wrapper function to call functions in the fda package to... |

internalModelPrep | Do internal model preparation for dynr |

LinearOsc | Simulated time series data for a deterministic linear damped... |

LogisticSetPointSDE | Simulated time series data for a stochastic linear damped... |

logLik.dynrCook | Extract the log likelihood from a dynrCook Object |

names-dynrCook-method | Extract the free parameter names of a dynrCook object |

names-dynrModel-method | Extract the free parameter names of a dynrModel object |

nobs.dynrCook | Extract the number of observations for a dynrCook object |

nobs.dynrModel | Extract the number of observations for a dynrModel object |

NonlinearDFAsim | Simulated multi-subject time series based on a dynamic factor... |

oscData | Another simulated multilevel multi-subject time series of a... |

Oscillator | Simulated time series data of a damped linear oscillator |

Outliers | Simulated time series data for detecting outliers. |

PFAsim | Simulated time series data of a multisubject process factor... |

plot.dynrCook | Plot method for dynrCook objects |

plotFormula | Plot the formula from a model |

plotGCV | A function to evaluate the generalized cross-validation (GCV)... |

PPsim | Simulated time series data for multiple eco-systems based on... |

prep.formulaDynamics | Recipe function for specifying dynamic functions using... |

prep.initial | Recipe function for preparing the initial conditions for the... |

prep.loadings | Recipe function to quickly create factor loadings |

prep.matrixDynamics | Recipe function for creating Linear Dynamcis using matrices |

prep.measurement | Prepare the measurement recipe |

prep.noise | Recipe function for specifying the measurement error and... |

prep.regimes | Recipe function for creating regime switching (Markov... |

prep.tfun | Create a dynrTrans object to handle the transformations and... |

printex | The printex Method |

RSPPsim | Simulated time series data for multiple eco-systems based on... |

substituteFormula | A internal-use only function for substituting formula. If the... |

summary.dynrCook | Get the summary of a dynrCook object |

theta_plot | A function to plot simple slopes and region of significance. |

TrueInit_Y14 | Simulated multilevel multi-subject time series of a Van der... |

VARsim | Simulated time series data for multiple imputation in dynamic... |

vcov.dynrCook | Extract the Variance-Covariance Matrix of a dynrCook object |

vdpData | Another simulated multilevel multi-subject time series of a... |

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