| checkPara | Check Parameter Values |
| draw_density | Draw probability density of three clusters. |
| eLNNpaired | Detecting Differentially Expressed Gene Probes via eLNNpaired... |
| estErrorRates | Estimate Error Rates |
| gen_eLNNpaired | Generate a Simulated Data Set from eLNNpaired Model |
| gen_simple | Generate Simulated Data Sets from a Simple Model |
| getPara.orig | Translate Re-Parameterized Parameters to Original Scale |
| getRePara | Parameter Reparameterization |
| gtPaired | Wrapper function for gt |
| lmPerGenePaired | Wrapper function of lmPerGene |
| samrOneClass | A Wrapper Function of samr for Paired Data |
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