Files in ecodive
Parallel and Memory-Efficient Ecological Diversity Metrics
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/beta_div.r
R/data.r
R/validate.r
R/documentation.r
R/utils.r
R/read_tree.r
R/alpha_div.r
R/rarefy.r
src/gower.c
src/beta_div.c
src/faith.c
src/rarefy.c
src/read_tree.c
src/alpha_div.c
src/init.c
src/get.h
src/utils.c
src/get.c
src/unifrac.c
inst/doc/unifrac.Rmd
inst/doc/adiv.html
inst/doc/benchmark.html
inst/doc/benchmark.R
inst/doc/ecodive.Rmd
inst/doc/adiv.Rmd
inst/doc/ecodive.html
inst/doc/unifrac.R
inst/doc/unifrac.html
inst/doc/bdiv.html
inst/doc/bdiv.Rmd
inst/doc/benchmark.Rmd
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-validate.r
tests/testthat/test-alpha_div.r
tests/testthat/test-read_tree.r
tests/testthat/test-rarefy.r
tests/testthat/test-beta_div.r
tests/testthat/helper.r
vignettes/unifrac.Rmd
vignettes/ecodive.Rmd
vignettes/adiv.Rmd
vignettes/bdiv.Rmd
vignettes/benchmark.Rmd
data/ex_tree.rda
data/ex_counts.rda
man/ex_tree.Rd
man/generalized_unifrac.Rd
man/manhattan.Rd
man/n_cpus.Rd
man/unweighted_unifrac.Rd
man/kulczynski.Rd
man/ex_counts.Rd
man/jaccard.Rd
man/documentation.Rd
man/inv_simpson.Rd
man/rarefy.Rd
man/read_tree.Rd
man/faith.Rd
man/weighted_normalized_unifrac.Rd
man/canberra.Rd
man/chao1.Rd
man/variance_adjusted_unifrac.Rd
man/shannon.Rd
man/weighted_unifrac.Rd
man/bray_curtis.Rd
man/gower.Rd
man/simpson.Rd
man/euclidean.Rd
man/figures/unifrac-tree.png
man/figures/adiv-benchmark.svg
man/figures/logo.png
man/figures/bdiv-benchmark.svg
man/figures/unifrac-benchmark.svg
man/figures/unifrac-weights.png
