effectR: Predicts Oomycete Effectors
Version 1.0.1

Predicts cytoplasmic effector proteins using genomic data by searching for motifs of interest using regular expression searches and hidden Markov models (HMM) based in Haas et al. (2009) .

Package details

AuthorJavier Tabima [aut, cre], Niklaus J. Grunwald [ths]
Date of publication2018-04-25 19:51:29 UTC
MaintainerJavier Tabima <[email protected]>
LicenseGPL-2 | GPL-3
Version1.0.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("effectR")

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effectR documentation built on April 26, 2018, 1:04 a.m.