Files in effectR
Predicts Oomycete Effectors

MD5

DESCRIPTION

NAMESPACE

inst/shiny/server.R inst/shiny/ui.R

inst/shiny/Examples/test_infestans.fasta

inst/shiny/Files/AA.fasta

inst/doc/effectR.Rmd inst/doc/effectR.R

inst/doc/effectR.html

inst/extdata/Alin_infestans.fasta

inst/extdata/REGEX.fasta

inst/extdata/test_infestans.fasta

vignettes/effectR.Rmd R/package.R R/datasets.R R/hmm.logo.R R/shiny.effectR.R R/internal.R R/effector.summary.R R/hmm.search.R R/regex.search.R man/effector.summary.Rd man/candidate.rxlr.Rd man/effectR.Rd man/hmm.logo.Rd man/regex.search.Rd man/hmm.search.Rd man/get_mafft_path.Rd man/get_hmmer_path.Rd man/shiny.effectR.Rd man/fasta_to_stockholm.Rd

build/vignette.rds

tests/testthat.R tests/testthat/test_effector_summary.R tests/testthat/test_HMM.R tests/testthat/test_regex.R tests/testthat/test_HMM_logo.R

data/candidate_rxlr.RData

effectR documentation built on May 1, 2019, 7:28 p.m.

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