Files in eyeris

Flexible, Extensible, & Reproducible Pupillometry Preprocessing

NEWS.md README.md R/eyeris-package.R R/utils-error_handler.R R/utils-progress_bar.R R/pipeline-confounds.R R/utils-epoch.R R/pipeline-downsample.R R/utils-eyelogger.R R/utils-parsers.R R/utils-alert.R R/utils-baseline.R R/plot.eyeris.R R/pipeline-lpfilt.R R/pipeline-deblink.R R/pipeline-epoch.R R/pipeline-zscore.R R/pipeline-detrend.R R/pipeline-handler.R R/utils-render_report.R R/pipeline-glassbox.R R/pipeline-loadasc.R R/constants.R R/zzz.R R/pipeline-detransient.R R/pipeline-bidsify.R R/pipeline-bin.R R/utils-checks.R R/utils-gallery.R R/pipeline-interpolate.R inst/doc/reports.Rmd inst/doc/reports.R inst/doc/complete-pipeline.R inst/doc/epoching-bids-reports.R inst/doc/epoching-bids-reports.Rmd inst/doc/anatomy.R inst/doc/anatomy.Rmd inst/doc/complete-pipeline.Rmd inst/doc/custom-extensions.R inst/doc/custom-extensions.Rmd tests/testthat.R tests/testthat/test-time_monotonicity.R tests/testthat/test-bin.R tests/testthat/test-load_asc.R tests/testthat/test-downsample.R tests/testthat/test-parse_eyelink_info.R tests/testthat/test-plot_gaze_heatmap.R vignettes/reports.Rmd vignettes/epoching-bids-reports.Rmd vignettes/anatomy.Rmd vignettes/complete-pipeline.Rmd vignettes/custom-extensions.Rmd man/sanitize_event_tag.Rd man/detransient.Rd man/deblink.Rd man/summarize_confounds.Rd man/export_confounds_to_csv.Rd man/check_start_end_timestamps.Rd man/normalize_gaze_coords.Rd man/check_epoch_input.Rd man/make_md_table.Rd man/epoch_and_baseline_block.Rd man/get_confounds_for_step.Rd man/index_metadata.Rd man/calculate_epoched_confounds.Rd man/check_and_create_dir.Rd man/extract_baseline_epochs.Rd man/parse_eyelink_info.Rd man/downsample.Rd man/check_input.Rd man/make_report.Rd man/lpfilt.Rd man/evaluate_pipeline_step_params.Rd man/zscore_pupil.Rd man/load_asc.Rd man/check_time_monotonic.Rd man/draw_na_lines.Rd man/compute_baseline.Rd man/epoch_manually.Rd man/speed.Rd man/bin.Rd man/check_epoch_msg_values.Rd man/check_epoch_manual_input_dfs.Rd man/epoch_start_end_msg.Rd man/add_unique_event_identifiers.Rd man/plot_pupil_distribution.Rd man/check_data.Rd man/plot_detrend_overlay.Rd man/zscore.Rd man/pipeline_handler.Rd man/process_epoch_and_baselines.Rd man/epoch_start_msg_and_limits.Rd man/robust_plot.Rd man/detrend_pupil.Rd man/check_limits.Rd man/detransient_pupil.Rd man/eyeris-package.Rd man/render_report.Rd man/make_prog_summary_plot.Rd man/downsample_pupil.Rd man/slice_epoch.Rd man/print_plots.Rd man/alert.Rd man/make_epoch_label.Rd man/check_pupil_cols.Rd man/detrend.Rd man/prompt_user.Rd man/interpolate_pupil.Rd man/counter_bar.Rd man/slice_epochs_with_limits.Rd man/error_handler.Rd man/epoch_only_start_msg.Rd man/plot_with_seed.Rd man/tick.Rd man/lpfilt_pupil.Rd man/plot_gaze_heatmap.Rd man/merge_events_with_timeseries.Rd man/plot.eyeris.Rd man/clean_string.Rd man/save_detrend_plots.Rd man/tag_gaze_coords.Rd man/bidsify.Rd man/check_baseline_inputs.Rd man/find_baseline_structure.Rd man/check_baseline_epoch_counts.Rd man/make_baseline_label.Rd man/slice_epochs_no_limits.Rd man/save_progressive_summary_plots.Rd man/tag_blinks.Rd man/count_epochs.Rd man/calc_euclidean_dist.Rd man/eyelogger.Rd man/eyelink_asc_demo_dataset.Rd man/draw_random_epochs.Rd man/eyeris_color_palette.Rd man/epoch_pupil.Rd man/get_block_numbers.Rd man/format_call_stack.Rd man/parse_call_stack.Rd man/check_baseline_mean.Rd man/check_column.Rd man/print_lightbox_img_html.Rd man/bin_pupil.Rd man/get_timestamps.Rd man/make_md_table_multiline.Rd man/filter_epochs.Rd man/add_unique_identifiers_to_df.Rd man/convert_nested_dt.Rd man/make_gallery.Rd man/epoch.Rd man/deblink_pupil.Rd man/check_epoch_manual_input_data.Rd man/interpolate.Rd man/progress_bar.Rd man/glassbox.Rd