Files in eyeris
Flexible, Extensible, & Reproducible Pupillometry Preprocessing
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/utils-parquet-split.R
R/core-logging.R
R/eyeris-package.R
R/utils-error_handler.R
R/utils-progress_bar.R
R/pipeline-confounds.R
R/utils-epoch.R
R/pipeline-downsample.R
R/utils-eyelogger.R
R/utils-database.R
R/utils-parsers.R
R/utils-baseline.R
R/plot.eyeris.R
R/pipeline-lpfilt.R
R/pipeline-deblink.R
R/pipeline-epoch.R
R/utils-boilerplate.R
R/pipeline-zscore.R
R/pipeline-detrend.R
R/utils-zip-gallery.R
R/pipeline-handler.R
R/utils-render_report.R
R/pipeline-glassbox.R
R/pipeline-loadasc.R
R/constants.R
R/zzz.R
R/pipeline-detransient.R
R/utils-zip-cleanup.R
R/pipeline-bidsify.R
R/pipeline-bin.R
R/utils-checks.R
R/utils-gallery.R
R/pipeline-interpolate.R
inst/CITATION
inst/WORDLIST
inst/doc/internal-api.html
inst/doc/reports.Rmd
inst/doc/reports.R
inst/doc/chunked-database-export.html
inst/doc/complete-pipeline.R
inst/doc/epoching-bids-reports.R
inst/doc/reports.html
inst/doc/epoching-bids-reports.Rmd
inst/doc/chunked-database-export.Rmd
inst/doc/database-guide.html
inst/doc/epoching-bids-reports.html
inst/doc/chunked-database-export.R
inst/doc/internal-api.Rmd
inst/doc/database-guide.Rmd
inst/doc/anatomy.R
inst/doc/anatomy.Rmd
inst/doc/custom-extensions.html
inst/doc/anatomy.html
inst/doc/database-guide.R
inst/doc/complete-pipeline.html
inst/doc/complete-pipeline.Rmd
inst/doc/custom-extensions.R
inst/doc/custom-extensions.Rmd
inst/doc/internal-api.R
inst/rmarkdown/css/report.css
inst/www/js/zip.min.js
inst/www/js/lightbox.min.js
inst/www/fonts/glyphicons-halflings-regular.woff
inst/www/fonts/glyphicons-halflings-regular.ttf
inst/www/fonts/glyphicons-halflings-regular.woff2
inst/www/fonts/glyphicons-halflings-regular.eot
inst/www/fonts/glyphicons-halflings-regular.svg
inst/www/images/loading.gif
inst/www/images/close.png
inst/www/images/prev.png
inst/www/images/next.png
inst/www/css/lightbox.min.css
inst/www/css/bootstrap.min.css
inst/extdata/binocular.asc
inst/extdata/memory.asc
inst/figures/sticker.png
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-format_call_stack.R
tests/testthat/test-time_monotonicity.R
tests/testthat/test-confounds.R
tests/testthat/test-plot-distribution.R
tests/testthat/test-bin.R
tests/testthat/test-bidsify-task-run-collision.R
tests/testthat/test-boilerplate.R
tests/testthat/test-parallel-database.R
tests/testthat/test-load_asc.R
tests/testthat/test-parquet-split.R
tests/testthat/test-database.R
tests/testthat/test-downsample.R
tests/testthat/test-compute_run_data_loss.R
tests/testthat/test-parse_eyelink_info.R
tests/testthat/test-plot_gaze_heatmap.R
tests/testthat/test-binocular.R
tests/testthat/test-chunked-processing.R
vignettes/reports.Rmd
vignettes/epoching-bids-reports.Rmd
vignettes/chunked-database-export.Rmd
vignettes/internal-api.Rmd
vignettes/database-guide.Rmd
vignettes/anatomy.Rmd
vignettes/complete-pipeline.Rmd
vignettes/custom-extensions.Rmd
vignettes/psychopy-eyetracker-sr-research-plug-in.png
man/sanitize_event_tag.Rd
man/detransient.Rd
man/deblink.Rd
man/connect_eyeris_database.Rd
man/create_epoch_images_zip.Rd
man/log_message.Rd
man/summarize_confounds.Rd
man/export_confounds_to_csv.Rd
man/eyeris_db_collect.Rd
man/process_eyeris_data.Rd
man/print.eyeris_boilerplate.Rd
man/check_start_end_timestamps.Rd
man/normalize_gaze_coords.Rd
man/check_epoch_input.Rd
man/make_bids_fname.Rd
man/log_error.Rd
man/make_md_table.Rd
man/eyeris_db_to_chunked_files.Rd
man/epoch_and_baseline_block.Rd
man/get_confounds_for_step.Rd
man/eyeris_db_summary.Rd
man/index_metadata.Rd
man/filter_task_run_dirs.Rd
man/calculate_epoched_confounds.Rd
man/write_eyeris_data_to_db.Rd
man/check_and_create_dir.Rd
man/plot_binocular_correlation.Rd
man/extract_baseline_epochs.Rd
man/process_chunked_query.Rd
man/parse_eyelink_info.Rd
man/eyeris_db_split_for_sharing.Rd
man/downsample.Rd
man/check_input.Rd
man/glassbox_internal.Rd
man/make_report.Rd
man/log_success.Rd
man/lpfilt.Rd
man/evaluate_pipeline_step_params.Rd
man/is_binocular_object.Rd
man/zscore_pupil.Rd
man/load_asc.Rd
man/check_time_monotonic.Rd
man/is_decimated_col.Rd
man/draw_na_lines.Rd
man/read_eyeris_parquet.Rd
man/compute_baseline.Rd
man/epoch_manually.Rd
man/speed.Rd
man/bin.Rd
man/check_epoch_msg_values.Rd
man/create_table_name.Rd
man/cleanup_run_dir_images.Rd
man/check_epoch_manual_input_dfs.Rd
man/epoch_start_end_msg.Rd
man/add_unique_event_identifiers.Rd
man/run_dir_pattern.Rd
man/plot_pupil_distribution.Rd
man/check_data.Rd
man/plot_detrend_overlay.Rd
man/zscore.Rd
man/eyeris_db_to_parquet.Rd
man/pipeline_handler.Rd
man/process_epoch_and_baselines.Rd
man/cleanup_temp_database.Rd
man/epoch_start_msg_and_limits.Rd
man/robust_plot.Rd
man/disconnect_eyeris_database.Rd
man/detrend_pupil.Rd
man/check_limits.Rd
man/build_boilerplate_md.Rd
man/detransient_pupil.Rd
man/eyeris-package.Rd
man/extract_event_ids.Rd
man/render_report.Rd
man/eyelink_asc_binocular_demo_dataset.Rd
man/make_prog_summary_plot.Rd
man/downsample_pupil.Rd
man/slice_epoch.Rd
man/print_plots.Rd
man/make_epoch_label.Rd
man/check_pupil_cols.Rd
man/detrend.Rd
man/prompt_user.Rd
man/create_temp_eyeris_database.Rd
man/cleanup_source_figures_post_render.Rd
man/interpolate_pupil.Rd
man/counter_bar.Rd
man/log_info.Rd
man/make_run_dir_name.Rd
man/slice_epochs_with_limits.Rd
man/boilerplate_license_note.Rd
man/eyeris_db_list_tables.Rd
man/error_handler.Rd
man/epoch_only_start_msg.Rd
man/plot_with_seed.Rd
man/tick.Rd
man/compute_run_data_loss.Rd
man/lpfilt_pupil.Rd
man/plot_gaze_heatmap.Rd
man/merge_events_with_timeseries.Rd
man/get_log_timestamp.Rd
man/log_warn.Rd
man/merge_temp_database.Rd
man/plot.eyeris.Rd
man/clean_string.Rd
man/save_detrend_plots.Rd
man/tag_gaze_coords.Rd
man/boilerplate.Rd
man/print_lightbox_img_html_legacy.Rd
man/bidsify.Rd
man/check_baseline_inputs.Rd
man/find_baseline_structure.Rd
man/trim_pre_decimation_cols.Rd
man/check_baseline_epoch_counts.Rd
man/describe_boilerplate_step.Rd
man/logging.Rd
man/make_baseline_label.Rd
man/eyeris_db_read.Rd
man/slice_epochs_no_limits.Rd
man/save_progressive_summary_plots.Rd
man/tag_blinks.Rd
man/check_arrow.Rd
man/count_epochs.Rd
man/calc_euclidean_dist.Rd
man/eyelogger.Rd
man/eyelink_asc_demo_dataset.Rd
man/draw_random_epochs.Rd
man/eyeris_color_palette.Rd
man/epoch_pupil.Rd
man/bp_num.Rd
man/get_pre_decimation_block.Rd
man/get_block_numbers.Rd
man/format_call_stack.Rd
man/parse_call_stack.Rd
man/eyeris_db_disconnect.Rd
man/eyeris_db_reconstruct_from_chunks.Rd
man/run_bidsify.Rd
man/check_baseline_mean.Rd
man/check_column.Rd
man/print_lightbox_img_html.Rd
man/check_duckdb.Rd
man/slice_epoch_window.Rd
man/write_csv_and_db.Rd
man/bin_pupil.Rd
man/get_timestamps.Rd
man/make_md_table_multiline.Rd
man/filter_epochs.Rd
man/add_unique_identifiers_to_df.Rd
man/convert_nested_dt.Rd
man/make_gallery.Rd
man/zip_and_cleanup_source_figures.Rd
man/epoch.Rd
man/describe_boilerplate_steps.Rd
man/eyeris_db_connect.Rd
man/should_omit_parameter.Rd
man/deblink_pupil.Rd
man/check_epoch_manual_input_data.Rd
man/interpolate.Rd
man/should_plot_binoc_cors.Rd
man/progress_bar.Rd
man/glassbox.Rd
man/figures/README-unnamed-chunk-3-1.png
man/figures/README-timeseries-plot-6.png
man/figures/README-timeseries-plot-8.png
man/figures/logo.png
man/figures/README-timeseries-plot-1.png
man/figures/README-timeseries-plot-3.png
man/figures/README-timeseries-plot-7.png
man/figures/README-timeseries-plot-2.png
man/figures/README-timeseries-plot-5.png
man/figures/README-timeseries-plot-4.png
