Man pages for fabMix
Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components

complete.log.likelihoodComplete log-likelihood function for xCx models.
complete.log.likelihood_q0Complete log-likelihood function for xUx models and q=0
complete.log.likelihood_q0_sameSigmaComplete log-likelihood function for xCx models and q=0
complete.log.likelihood_SjComplete log-likelihood function for xUx models.
compute_A_B_G_D_and_simulate_mu_LambdaComputation and simulations
compute_A_B_G_D_and_simulate_mu_Lambda_CCUComputation and simulations for CCU
compute_A_B_G_D_and_simulate_mu_Lambda_CUUComputation and simulations for CUU
compute_A_B_G_D_and_simulate_mu_Lambda_q0Computation and simulations for q = 0.
compute_A_B_G_D_and_simulate_mu_Lambda_q0_sameSigmaComputation and simulations for q = 0.
compute_A_B_G_D_and_simulate_mu_Lambda_SjComputation and simulations
compute_sufficient_statisticsCompute sufficient statistics
compute_sufficient_statistics_given_muCompute sufficient statistics given mu
compute_sufficient_statistics_q0Compute sufficient statistics for q = 0
CorMat_mcmc_summaryCompute quantiles for the correlation matrix.
CovMat_mcmc_summaryCompute quantiles for the covariance matrix.
dealWithLabelSwitchingApply label switching algorithms
fabMixMain function
fabMix_CxCFunction to estimate the 'CUC' and 'CCC' models
fabMix_CxUFunction to estimate the 'CCU' and 'CUU' models
fabMix_missing_valuesFunction to estimate the UUU or UCU models in case of missing...
fabMix-packageOverfitting Bayesian Mixtures of Factor Analyzers with...
fabMix_parallelModelsFunction for model-level parallelization
fabMix_UxCFunction to estimate the 'UUC' and 'UCC' models
fabMix_UxUFunction to estimate the 'UUU' and 'UCU' model
getStuffForDICCompute information criteria
log_dirichlet_pdfLog-density function of the Dirichlet distribution
myDirichletSimulate from the Dirichlet distribution
observed.log.likelihood0Log-likelihood of the mixture model
observed.log.likelihood0_q0_sameSigmaLog-likelihood of the mixture model for q=0 and same variance...
observed.log.likelihood0_SjLog-likelihood of the mixture model
observed.log.likelihood0_Sj_q0Log-likelihood of the mixture model for q=0
overfittingMFABasic MCMC sampler for the 'UCU' model
overfittingMFA_CCCBasic MCMC sampler for the 'CCC' model
overfittingMFA_CCUBasic MCMC sampler for the 'CCU' model
overfittingMFA_CUCBasic MCMC sampler for the 'CUC' model
overfittingMFA_CUUBasic MCMC sampler for the 'CUU' model
overfittingMFA_missing_valuesBasic MCMC sampler for the case of missing data
overfittingMFA_SjBasic MCMC sampler for the 'UUU' model
overfittingMFA_Sj_missing_valuesBasic MCMC sampler for the case of missing data and different...
overfittingMFA_UCCBasic MCMC sampler for the 'UCC' model
overfittingMFA_UUCBasic MCMC sampler for the 'UUC' model
overfitting_q0MCMC sampler for q=0
overfitting_q0_sameSigmaMCMC sampler for q=0 and same error variance parameterization
plot.fabMix.objectPlot function
print.fabMix.objectPrint function
readLambdaValuesRead Lambda values.
simDataSynthetic data generator
simData2Synthetic data generator 2
summary.fabMix.objectSummary method
update_all_yGibbs sampling for y in 'xCx' model
update_all_y_SjGibbs sampling for y in 'xUx' model
update_OmegaINVGibbs sampling for Omega^{-1}
update_OmegaINV_CxxGibbs sampling for Omega^{-1} for Cxx model
update_SigmaINV_fasterGibbs sampling for Sigma^{-1}
update_SigmaINV_faster_q0Gibbs sampling for Sigma^{-1} per component for q=0
update_SigmaINV_faster_q0_sameSigmaGibbs sampling for Sigma^{-1} per component for q=0
update_SigmaINV_faster_SjGibbs sampling for Sigma^{-1} per component
update_SigmaINV_xCCGibbs sampling for Sigma^{-1} for xCC models
update_SigmaINV_xUCGibbs sampling for Sigma^{-1} per component for xUC models
update_z2Collapsed Gibbs for z using matrix inversion lemma
update_z2_SjCollapsed Gibbs for z using matrix inversion lemma
update_z4Collapsed Gibbs for z
update_z4_SjCollapsed Gibbs for z
update_z_bGibbs sampling for z
update_z_b_SjGibbs sampling for z
update_z_q0Gibbs sampling for z for q=0
update_z_q0_sameSigmaGibbs sampling for z for q=0
waveDataset1500Wave dataset
fabMix documentation built on Jan. 22, 2020, 1:07 a.m.