Description Usage Arguments Details Value Author(s) References See Also Examples
This is a wrapper for exclusionPower
.
The probability of exclusion (PE) is calculated for each marker and combined
for all markers.
1 2 |
pedigrees |
A |
datamatrix |
A data frame, each row gives the genotype of one individual, a pair of columns represents a marker. |
loci |
A |
claim |
Integer. Index of the claimed pedigree, typically the one where |
true |
Integer. Index of the assumed true pedigree for PE calculation, typically the one where POI is assumed to be an unrelated individual. |
available |
Character or integer identifying person to be simulated. |
file |
Charachter. If not |
ignore |
Logical. If |
Wrapper for exclusionPower
A data frame. The first column gives the name of the markers, the second the PE. The last line gives the combined result for all markers.
Thore Egeland <Thore.Egeland@gmail.com>
Egeland, Pinto and Vigeland (2014).
1 2 3 4 5 6 7 |
Loading required package: Familias
Loading required package: kinship2
Loading required package: Matrix
Loading required package: quadprog
Loading required package: paramlink
Loading required package: Rsolnp
marker PE
1 D3S1358 0.52136317
2 TH01 0.00000000
3 D21S11 0.16988273
4 D18S51 0.47672909
5 PENTA E 0.00000000
6 D5S818 0.00000000
7 D13S317 0.00000000
8 D7S820 0.00000000
9 D16S539 0.00000000
10 CSF1PO 0.08965897
11 PENTA D 0.18889470
12 VWA 0.00000000
13 D8S1179 0.19612518
14 TPOX 0.19250700
15 FGA 0.41761726
16 D19S433 0.20519893
17 D1S1656 0.00000000
18 D12S391 0.28118534
19 D2S1338 0.50620741
20 D6S1043 0.00000000
21 D22S1045 0.03481956
22 D2S441 0.21436900
23 SE33 0.00000000
24 D10S1248 0.23619600
25 Combined 0.99051760
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