flexrsurv: Flexible Relative Survival

Perform relative survival analyses using approaches described in Remontet et al. (2007) <DOI:10.1002/sim.2656> and Mahboubi et al. (2011) <DOI:10.1002/sim.4208>. It implements non-linear, non-proportional effects and both non proportional and non linear effects using splines (B-spline and truncated power basis).

Author
Isabelle Clerc-Urms [aut], Michel Grzebyk [aut, cre], Guy Hdelin [ctb], CENSUR working survival group [ctb]
Date of publication
2016-04-26 19:32:05
Maintainer
Michel Grzebyk <michel.grzebyk@inrs.fr>
License
GPL (>= 2.0)
Version
1.3.3

View on CRAN

Man pages

Flexrsurv
Fit Relative Survival Model
flexrsurv-internal
Internal Objects and functions for the 'flexrsurv ' package
Flexrsurvpackage
Compute flexible relative survival analyses
NLL
Non Log-Linear effect
NLLbetaNPHalpha
Non Log-Linear effect and non proportional effect
NPH
Non Proportional Hazard effect
NPHNLL
Non Proportional Hazard and Non Log-Linear effect
print.flexrsurv
Print a Short Summary of a Relative Survival Model
summary.flexrsurv
Summarizing Flexible Relative Survival Model Fits

Files in this package

flexrsurv
flexrsurv/src
flexrsurv/src/EvaluateSplineBasis.c
flexrsurv/src/EvaluateTPSplineBasis.c
flexrsurv/src/flexrsurv.h
flexrsurv/src/EvaluateCLTPSplineBasis.c
flexrsurv/src/PredictTPSplineBasis.c
flexrsurv/src/WeightedCumulativeExposure.c
flexrsurv/src/PredictSplineBasis.c
flexrsurv/src/EvaluateCLSplineBasis.c
flexrsurv/NAMESPACE
flexrsurv/R
flexrsurv/R/default_bands.R
flexrsurv/R/ll_flexrsurv_beta0beta.R
flexrsurv/R/summary.flexrsurv.R
flexrsurv/R/ll_flexrsurv_fromto_GA0B0AB_bh.R
flexrsurv/R/split_data.R
flexrsurv/R/StepParam.R
flexrsurv/R/gr_ll_flexrsurv_GA0B0AB.R
flexrsurv/R/make.formulastep.formula.R
flexrsurv/R/intweights.R
flexrsurv/R/gr_ll_flexrsurv_GA0B0AB_bh.R
flexrsurv/R/flexrsurv.ll.fit.R
flexrsurv/R/variable2term.R
flexrsurv/R/flexrsurv.glmiterative.fit.R
flexrsurv/R/make.shortnames.coefficients.R
flexrsurv/R/get_list_var.R
flexrsurv/R/ll_flexrsurv_fromto_alpha0alpha_bh.R
flexrsurv/R/onAttach.R
flexrsurv/R/gr_ll_flexrsurv_fromto_GA0B0AB.R
flexrsurv/R/ReadDesignFlexrsurv.R
flexrsurv/R/matrix.util.R
flexrsurv/R/ll_flexrsurv_fromto_gamma0_bh.R
flexrsurv/R/ll_flexrsurv_GA0B0AB_bh.R
flexrsurv/R/AllClass.R
flexrsurv/R/make.control.flexrsurv.R
flexrsurv/R/ll_flexrsurv_fromto_beta0beta.R
flexrsurv/R/make.mle.formula.R
flexrsurv/R/opg_flexrsurv_G0A0B0AB_bh.R
flexrsurv/R/ll_flexrsurv_beta0beta_bh.R
flexrsurv/R/get_Splinebasis.R
flexrsurv/R/ll_flexrsurv_alpha0alpha_bh.R
flexrsurv/R/fix.flexrsurv.formula.R
flexrsurv/R/ll_flexrsurv_fromto_alpha0alpha.R
flexrsurv/R/rateTD.R
flexrsurv/R/Flexrsurv.R
flexrsurv/R/opg_flexrsurv_fromto_G0A0B0AB.R
flexrsurv/R/rate_NPHNLL.R
flexrsurv/R/keep.terms.R
flexrsurv/R/intTD_base_base.R
flexrsurv/R/opg_flexrsurv_fromto_G0A0B0AB_bh.R
flexrsurv/R/ll_flexrsurv_fromto_gamma0.R
flexrsurv/R/nl.td.func.R
flexrsurv/R/SplineParam.R
flexrsurv/R/intTD.R
flexrsurv/R/converged.R
flexrsurv/R/design.R
flexrsurv/R/NLL.NPH.func.R
flexrsurv/R/ll_flexrsurv_GA0B0AB.R
flexrsurv/R/computeLinearPredictor.R
flexrsurv/R/flexrsurv.ll.R
flexrsurv/R/flexrsurv.ll.fromto.fit.R
flexrsurv/R/ll_flexrsurv_fromto_GA0B0AB.R
flexrsurv/R/print.flexrsurv.R
flexrsurv/R/print.summary.flexrsurv.R
flexrsurv/R/rateTD_bh.R
flexrsurv/R/DesignMatrix.R
flexrsurv/R/computeCumulativeHazard.R
flexrsurv/R/make.glm.formula.R
flexrsurv/R/gr_ll_flexrsurv_fromto_GA0B0AB_bh.R
flexrsurv/R/cutT.R
flexrsurv/R/ll_flexrsurv_gamma0.R
flexrsurv/R/flexrsurv.glm.fit.R
flexrsurv/R/intTD_base.R
flexrsurv/R/intTDfromto_base.R
flexrsurv/R/ll_flexrsurv_fromto_beta0beta_bh.R
flexrsurv/R/opg_flexrsurv_G0A0B0AB.R
flexrsurv/R/computeStdErrorLinearPredictor.R
flexrsurv/R/intTDfromto.R
flexrsurv/R/ll_flexrsurv_gamma0_bh.R
flexrsurv/R/WhichBand.R
flexrsurv/R/get_NPHNLL_vars.R
flexrsurv/R/ExpandCoefBasis.R
flexrsurv/R/zzz.R
flexrsurv/R/ll_flexrsurv_alpha0alpha.R
flexrsurv/R/make.formulastep.terms.R
flexrsurv/MD5
flexrsurv/build
flexrsurv/build/partial.rdb
flexrsurv/DESCRIPTION
flexrsurv/man
flexrsurv/man/Flexrsurv.Rd
flexrsurv/man/flexrsurv-internal.Rd
flexrsurv/man/Flexrsurvpackage.Rd
flexrsurv/man/NLL.Rd
flexrsurv/man/summary.flexrsurv.Rd
flexrsurv/man/print.flexrsurv.Rd
flexrsurv/man/NPH.Rd
flexrsurv/man/NPHNLL.Rd
flexrsurv/man/NLLbetaNPHalpha.Rd