ContrastGraphSummary: ContrastGraphSummary

In fst4pg: Genetic Distance Segmentation for Population Genetics

ContrastGraphSummary

Description

Display mean ratio and/or number of selection graphs

Usage

ContrastGraphSummary(
  CS,
  Info,
  Ratio.thres,
  Coef = 1,
  CutNbSel = NULL,
  CutMeanRatio = NULL
)

Arguments

CS	a contrast summary, as provided by function ContrastSummary
Info	a data.frame providing information about markers
Ratio.thres	a numeric value, regions exhibiting Fst levels whose ratio with the reference level is higher than Ratio.thres will be highlighted.
Coef	a scalar, controling font sizes for the graph, optional
CutNbSel	a scalar, providing a y-value for an horizontal line on the NbSel graph
CutMeanRatio	a scalar, providing a y-value for an horizontal line on the MeanRatio graph

Value

two ggplots objects, called NbSel and MeanRatio, respectively.

fst4pg documentation built on July 4, 2022, 1:06 a.m.