DF4Plot1Prof: DF4Plot1Prof

In fst4pg: Genetic Distance Segmentation for Population Genetics

DF4Plot1Prof

Description

Shape the data for Fst profile representation

Usage

DF4Plot1Prof(Info, HF, FstProf, Coord = NULL, Threshold = NULL)

Arguments

Info	a data.frame providing information about markers
HF	a data.frame with 2 columns Fst and Weight, as obtained from the HudsonFst.m function
FstProf	an Fst profile, as obtained from the HudsonFst.prof function
Coord	a vector with the minimum and maximum coordinates (i.e. positions along the genome), providing the range of the genomic region that will be plotted, optional.
Threshold	a numeric value. Markers belonging to regions whose Fst profile is higher than threshold will be highlighted. Optional.

Value

a data.frame that can be used as an input for function Plot1Prof

fst4pg documentation built on July 4, 2022, 1:06 a.m.