This option provides basic information on the data set. The output file is saved in the file yourdata.INF
. For each locus in each sample, several variables are calculated:
allele frequencies.
observed and expected genotype proportions.
$F_\mathrm{IS}$ estimates for each allele following @WeirC84.
global estimate of $F_\mathrm{IS}$ over alleles according to @WeirC84 (W&C) and @RobertsonH84 (R&H).
observed and “expected” numbers of homozygotes and heterozygotes. “Expected” here means the expected numbers, conditional on observed allelic counts, under HW equilibrium; the difference from naive products of observed allele frequencies is sometimes called Levene’s correction, after\index{Levene's correction} @Levene49.
the genotypic matrix.
A table of allele frequencies for each locus and for each sample is also computed.
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