# get_elts_gamma: The R implementation to get the elements necessary for... In genscore: Generalized Score Matching Estimators

## Description

The R implementation to get the elements necessary for calculations for the gamma setting (a=0.5, b=0).

## Usage

 1 2 3 4 5 6 7 8 9 get_elts_gamma( hdx, hpdx, x, centered = TRUE, profiled_if_noncenter = TRUE, scale = "", diagonal_multiplier = 1 ) 

## Arguments

 hdx A matrix, h(x) applied to the distance of x from the boundary of the domain, should be of the same dimension as x. hpdx A matrix, h\'(x) applied to the distance of x from the boundary of the domain, should be of the same dimension as x. x An n by p matrix, the data matrix, where n is the sample size and p the dimension. centered A boolean, whether in the centered setting (assume μ=η=0) or not. Default to TRUE. profiled_if_noncenter A boolean, whether in the profiled setting (λ_η=0) if non-centered. Parameter ignored if centered=TRUE. Default to TRUE. scale A string indicating the scaling method. Returned without being checked or used in the function body. Default to "norm". diagonal_multiplier A number >= 1, the diagonal multiplier.

## Details

For details on the returned values, please refer to get_elts_ab or get_elts.

## Value

A list that contains the elements necessary for estimation.

 n The sample size. p The dimension. centered The centered setting or not. Same as input. scale The scaling method. Same as input. diagonal_multiplier The diagonal multiplier. Same as input. diagonals_with_multiplier A vector that contains the diagonal entries of Γ after applying the multiplier. setting The setting "gamma". g_K The g vector. In the non-profiled non-centered setting, this is the g sub-vector corresponding to K. Gamma_K The Γ matrix with no diagonal multiplier. In the non-profiled non-centered setting, this is the Γ sub-matrix corresponding to K. g_eta Returned in the non-profiled non-centered setting. The g sub-vector corresponding to η. Gamma_K_eta Returned in the non-profiled non-centered setting. The Γ sub-matrix corresponding to interaction between K and η. Gamma_eta Returned in the non-profiled non-centered setting. The Γ sub-matrix corresponding to η. t1,t2 Returned in the profiled non-centered setting, where the η estimate can be retrieved from t1-t2*\hat{K} after appropriate resizing.

## Examples

  1 2 3 4 5 6 7 8 9 10 11 12 13 14 n <- 50 p <- 30 eta <- rep(0, p) K <- diag(p) domain <- make_domain("R+", p=p) x <- gen(n, setting="gamma", abs=FALSE, eta=eta, K=K, domain=domain, finite_infinity=100, xinit=NULL, seed=2, burn_in=1000, thinning=100, verbose=FALSE) h_hp <- get_h_hp("min_pow", 1.5, 3) h_hp_dx <- h_of_dist(h_hp, x, domain) # h and h' applied to distance from x to boundary elts <- get_elts_gamma(h_hp_dx$hdx, h_hp_dx$hpdx, x, centered=TRUE, scale="norm", diag=1.5) elts <- get_elts_gamma(h_hp_dx$hdx, h_hp_dx$hpdx, x, centered=FALSE, profiled_if_noncenter=TRUE, scale="norm", diag=1.7) elts <- get_elts_gamma(h_hp_dx$hdx, h_hp_dx$hpdx, x, centered=FALSE, profiled_if_noncenter=FALSE, scale="norm", diag=1.9) 

genscore documentation built on April 28, 2020, 1:06 a.m.