# gplots: Various R Programming Tools for Plotting Data

Various R programming tools for plotting data, including: - calculating and plotting locally smoothed summary function as ('bandplot', 'wapply'), - enhanced versions of standard plots ('barplot2', 'boxplot2', 'heatmap.2', 'smartlegend'), - manipulating colors ('col2hex', 'colorpanel', 'redgreen', 'greenred', 'bluered', 'redblue', 'rich.colors'), - calculating and plotting two-dimensional data summaries ('ci2d', 'hist2d'), - enhanced regression diagnostic plots ('lmplot2', 'residplot'), - formula-enabled interface to 'stats::lowess' function ('lowess'), - displaying textual data in plots ('textplot', 'sinkplot'), - plotting a matrix where each cell contains a dot whose size reflects the relative magnitude of the elements ('balloonplot'), - plotting "Venn" diagrams ('venn'), - displaying Open-Office style plots ('ooplot'), - plotting multiple data on same region, with separate axes ('overplot'), - plotting means and confidence intervals ('plotCI', 'plotmeans'), - spacing points in an x-y plot so they don't overlap ('space').

- Author
- Gregory R. Warnes, Ben Bolker, Lodewijk Bonebakker, Robert Gentleman, Wolfgang Huber Andy Liaw, Thomas Lumley, Martin Maechler, Arni Magnusson, Steffen Moeller, Marc Schwartz, Bill Venables
- Date of publication
- 2016-03-30 21:04:18
- Maintainer
- Gregory R. Warnes <greg@warnes.net>
- License
- GPL-2
- Version
- 3.0.1

## Man pages

- angleAxis
- Add a Axis to a Plot with Rotated Labels
- balloonplot
- Plot a graphical matrix where each cell contains a dot whose...
- bandplot
- Plot x-y Points with Locally Smoothed Mean and Standard...
- barplot2
- Enhanced Bar Plots
- boxplot2
- Produce a Boxplot Annotated with the Number of Observations
- ci2d
- Create 2-dimensional empirical confidence regions
- col2hex
- Convert color names to hex RGB strings
- colorpanel
- Generate a smoothly varying set of colors
- gplots-defunct
- Defunct functions
- gplots-deprecated
- Deprecated functions
- heatmap.2
- Enhanced Heat Map
- hist2d
- Compute and Plot a 2-Dimensional Histogram
- lmplot2
- Plots to assess the goodness of fit for the linear model...
- lowess
- Scatter Plot Smoothing
- ooplot
- Create an OpenOffice style plot
- overplot
- Plot multiple variables on the same region, with appropriate...
- plotCI
- Plot Error Bars and Confidence Intervals
- plotmeans
- Plot Group Means and Confidence Intervals
- qqnorm.aov
- Makes a half or full normal plot for the effects from an aov...
- residplot
- Undocumented functions
- rich.colors
- Rich Color Palettes
- rtPCR
- Teratogenesis rtPCR data
- sinkplot
- Send textual R output to a graphics device
- space
- Space points in an x-y plot so they don't overlap.
- textplot
- Display text information in a graphics plot.
- venn
- Plot a Venn diagram
- wapply
- Compute the Value of a Function Over a Local Region Of An X-Y...

## Files in this package

gplots |

gplots/TODO |

gplots/inst |

gplots/inst/TODO |

gplots/inst/NEWS |

gplots/inst/ChangeLog |

gplots/inst/doc |

gplots/inst/doc/venn.R |

gplots/inst/doc/BalloonPlot.pdf |

gplots/inst/doc/venn.Rnw |

gplots/inst/doc/venn.pdf |

gplots/tests |

gplots/tests/heatmap_to_heatmap.2_test.R |

gplots/tests/dat.csv |

gplots/tests/heatmap2Test.Rout.save |

gplots/tests/heatmap2Test.R |

gplots/tests/plotmeans_nobars.R |

gplots/tests/test_plottingDeepDendrogram.R |

gplots/NAMESPACE |

gplots/NEWS |

gplots/data |

gplots/data/rtPCR.rda |

gplots/R |

gplots/R/print.hist2d.R |

gplots/R/venn.R |

gplots/R/vennMembers.R |

gplots/R/angleAxis.R |

gplots/R/plotNode.R |

gplots/R/barplot2.R |

gplots/R/ci2d.R |

gplots/R/overplot.R |

gplots/R/ooplot.R |

gplots/R/space.R |

gplots/R/replaceTabs.R |

gplots/R/baseOf.R |

gplots/R/wapply.R |

gplots/R/bandplot.R |

gplots/R/boxplot2.R |

gplots/R/sinkplot.R |

gplots/R/smartlegend.R |

gplots/R/qqnorm.aov.R |

gplots/R/colorpanel.R |

gplots/R/lmplot2.R |

gplots/R/lowess.R |

gplots/R/plotmeans.R |

gplots/R/balloonplot.R |

gplots/R/col2hex.R |

gplots/R/plot.venn.R |

gplots/R/layout_set.R |

gplots/R/textplot.R |

gplots/R/print.ci2d.R |

gplots/R/heatmap.2.R |

gplots/R/plotCI.R |

gplots/R/residplot.R |

gplots/R/hist2d.R |

gplots/R/plot.lowess.R |

gplots/R/rich.colors.R |

gplots/vignettes |

gplots/vignettes/venn.Rnw |

gplots/MD5 |

gplots/build |

gplots/build/vignette.rds |

gplots/DESCRIPTION |

gplots/ChangeLog |

gplots/man |

gplots/man/lmplot2.Rd |

gplots/man/space.Rd |

gplots/man/plotmeans.Rd |

gplots/man/barplot2.Rd |

gplots/man/balloonplot.Rd |

gplots/man/residplot.Rd |

gplots/man/overplot.Rd |

gplots/man/sinkplot.Rd |

gplots/man/colorpanel.Rd |

gplots/man/bandplot.Rd |

gplots/man/gplots-defunct.Rd |

gplots/man/ooplot.Rd |

gplots/man/lowess.Rd |

gplots/man/rtPCR.Rd |

gplots/man/plotCI.Rd |

gplots/man/ci2d.Rd |

gplots/man/boxplot2.Rd |

gplots/man/col2hex.Rd |

gplots/man/wapply.Rd |

gplots/man/hist2d.Rd |

gplots/man/angleAxis.Rd |

gplots/man/heatmap.2.Rd |

gplots/man/textplot.Rd |

gplots/man/gplots-deprecated.Rd |

gplots/man/rich.colors.Rd |

gplots/man/venn.Rd |

gplots/man/qqnorm.aov.Rd |