catch.d: Catch at Age and Residuals

In gplots: Various R Programming Tools for Plotting Data

Catch at Age and Residuals

Description

Catch-at-age observed data and model residuals from Icelandic saithe assessment.

Usage

catch.d
catch.r

Format

Data frame containing three columns:

Year	year
Age	age
and
Catch	catch (thousands of individuals)
or
Resid	standardized residual

Details

The data are from Tables 8.2 and 8.6 in the ICES (2015) fish stock assessment of Icelandic saithe.

Source

ICES (2015) Report of the North-Western Working Group (NWWG). ICES CM 2015/ACOM:07, pp. 240–246.

See Also

bubbleplot is an effective way to visualize these data.

Examples

catch.t <- xtabs(Catch~Year+Age, catch.d)
catch.m <- as.matrix(as.data.frame(unclass(catch.t)))

# 1  Formula
bubbleplot(Catch~Age+Year, data=catch.d)
# Use rev=TRUE to get same layout as crosstab matrix:
print(catch.m)
bubbleplot(Catch~Age+Year, data=catch.d, rev=TRUE, las=1)

# 2  Data frame
bubbleplot(catch.d)

# 3  Matrix or table
bubbleplot(catch.m)
bubbleplot(catch.t)

# 4  Positive and negative values
bubbleplot(catch.r)
bubbleplot(Resid~Age+Year, catch.r, subset=Age %in% 4:9,
           rev=TRUE, xlim=c(3.5,9.5), cex=1.3)

gplots documentation built on Oct. 6, 2024, 1:07 a.m.