PlotModelCompareErrPrior: Diagnostic plot for estimated models (global error rate)

In grandR: Comprehensive Analysis of Nucleotide Conversion Sequencing Data

Diagnostic plot for estimated models (global error rate)

Description

This belongs to the fourth kind (model comparison) of diagnostic plots

Usage

PlotModelCompareErrPrior(
  data,
  label = "4sU",
  estimator = "Separate",
  model = "Binom"
)

Arguments

data	a grandR object
label	which label to consider (see GetDiagnosticParameters); cannot be NULL
estimator	which estimator to consider (see GetDiagnosticParameters); cannot be NULL
model	which model to consider (see GetDiagnosticParameters); cannot be NULL

Details

Compares the prior error rate (estimated from no4sU samples or from all other mismatch types) against the final error rate estimate.

Value

a list with a ggplot object, a description, and the desired size for the plot

grandR documentation built on April 4, 2025, 2:27 a.m.