PlotModelNtr: Diagnostic plot for estimated models (global NTR)

In grandR: Comprehensive Analysis of Nucleotide Conversion Sequencing Data

Diagnostic plot for estimated models (global NTR)

Description

This belongs to the third kind (model) of diagnostic plots

Usage

PlotModelNtr(data, label = "4sU", estimator = "Separate", model = "Binom")

Arguments

data	a grandR object
label	which label to consider (see GetDiagnosticParameters); cannot be NULL
estimator	which estimator to consider (see GetDiagnosticParameters); cannot be NULL
model	which model to consider (see GetDiagnosticParameters); cannot be NULL

Details

Shows the estimated global NTR (i.e. for all reads used for estimation of global paramters, what is the percentage of new RNA) for each sample.

Value

a list with a ggplot object, a description, and the desired size for the plot

grandR documentation built on April 4, 2025, 2:27 a.m.