growcurves: Bayesian Semi and Nonparametric Growth Curve Models that Additionally Include Multiple Membership Random Effects

Employs a non-parametric formulation for by-subject random effect parameters to borrow strength over a constrained number of repeated measurement waves in a fashion that permits multiple effects per subject. One class of models employs a Dirichlet process (DP) prior for the subject random effects and includes an additional set of random effects that utilize a different grouping factor and are mapped back to clients through a multiple membership weight matrix; e.g. treatment(s) exposure or dosage. A second class of models employs a dependent DP (DDP) prior for the subject random effects that directly incorporates the multiple membership pattern.

AuthorTerrance Savitsky
Date of publication2016-12-21 08:30:35
MaintainerTerrance Savitsky <tds151@gmail.com>
LicenseGPL (>= 2)
Version0.2.4.1

View on CRAN

Man pages

datbrghtmodterms: BRIGHT BDI depressive symptom data with (G = 4) module groups...

datbrghtterms: BRIGHT BDI depressive symptom data with (G = 4) session...

dateduc: Student test scores and associated teachers for a single...

datsim: Repeated measures for two groups of subjects drawn from mmcar...

datsimcov: Repeated measures for two groups of subjects drawn from mmcar...

datsimmult: Repeated measures for two groups of subjects with two...

ddpEffectsplot: Plot by-subject and by-treatment posterior mean values for...

ddpgrow: Bayesian semiparametric growth curve models.

ddpMCMCplots: generate plots of posterior samples under 'ddpgrow' model

ddpPost: Run a Bayesian mixed effects model for by-subject random...

ddp_quantiles: Produce quantile summaries of model posterior samples

dpgrow: Bayesian semiparametric growth curve models.

dpgrowmm: Bayesian semiparametric growth curve models with employment...

dpgrowmult: Bayesian semiparametric growth curve models under employment...

dpPost: Run a Bayesian mixed effects model for by-subject random...

effectsplot: Plot comparison of Effect parameters of a Multiple membership...

getmf: Produce fixed and random effects design matrices from single...

growcurves-package: Bayesian Semi and Nonparametric Growth Curve Models with...

growplot: Plot by-subject and by-group growth curves

growthCurve: Within subject model-predicted growth curve

lgmPost: Run a Bayesian mixed effects model for by-subject random...

mcmcPlots: generate plots of model(s) posterior results

mmCmvplusDpPost: Bayesian mixed effects model with a DP prior on by-subject...

mmCplusDpPost: Bayesian mixed effects model with a DP prior on by-subject...

mmIgroupDpPost: Bayesian mixed effects model with a DP prior on by-subject...

mmIplusDpPost: Bayesian mixed effects model with a DP prior on by-subject...

mmmultPost: Bayesian mixed effects model with a DP prior on by-subject...

plot.ddpgrow: Produce model plots

plot.dpgrow: Produce model plots

plot.dpgrowmm: Produce model plots

plot.dpgrowmult: Produce model plots

relabel: Relabel user vector input to sequential numerical

samples: Produce MCMC samples for model parameters

samples.ddpgrow: Produce samples of MCMC output

samples.dpgrow: Produce samples of MCMC output

samples.dpgrowmult: Produce samples of MCMC output

summary.ddpgrow: S3 functions of dpgrow

summary.dpgrow: S3 functions of dpgrow

summary.dpgrowmm: S3 functions of dpgrowmm

summary.dpgrowmult: S3 functions of dpgrowmult

summary_quantiles: Produce quantile summaries of model posterior samples

trtplot: Plot comparison of Mean Effects for Any Two Treatments

XZcov: generate fixed and random design matrices, X and Z

Files in this package

growcurves
growcurves/inst
growcurves/inst/CITATION
growcurves/tests
growcurves/tests/testthat
growcurves/tests/testthat/test-relabel.R
growcurves/tests/testthat/test-XZcov.R
growcurves/tests/testthat/test-dpgrow.R
growcurves/tests/testthat/test-dpgrowmult.R
growcurves/tests/testthat/test-trtplot.R
growcurves/tests/testthat/test-dpgrowmm.R
growcurves/tests/testthat/test-effectsplot.R
growcurves/tests/testthat/test-growplot.R
growcurves/tests/testthat/test-dpgrowmm-mv.R
growcurves/tests/testthat/test-ddpgrow.R
growcurves/tests/test-all.R
growcurves/src
growcurves/src/Makevars
growcurves/src/DPre.cpp
growcurves/src/lgm.cpp
growcurves/src/mmC.cpp
growcurves/src/mmCplusDP.cpp
growcurves/src/ddp.cpp
growcurves/src/mmIgroupDP.cpp
growcurves/src/mmIgroup.cpp
growcurves/src/mmmult.cpp
growcurves/src/mmIplusDP.cpp
growcurves/src/mmCmvplusDP.cpp
growcurves/src/Makevars.win
growcurves/src/mmCmiar.cpp
growcurves/src/mmCchol.cpp
growcurves/src/mmC.h
growcurves/src/mmI.cpp
growcurves/NAMESPACE
growcurves/NEWS
growcurves/data
growcurves/data/dateduc.RData
growcurves/data/datbrghtmodterms.RData
growcurves/data/datsimcov.RData
growcurves/data/datsim.RData
growcurves/data/datsimmult.RData
growcurves/data/datbrghtterms.RData
growcurves/R
growcurves/R/trtplot.R growcurves/R/XZcov.R growcurves/R/datsimmult.R growcurves/R/ddp_quantiles.R growcurves/R/relabel.R growcurves/R/dpgrowmm.R growcurves/R/datsim.R growcurves/R/dpgrowmult.R growcurves/R/effectsplot.R growcurves/R/getmf.R growcurves/R/ddpeffectsplot.R growcurves/R/summary_quantiles.R growcurves/R/mcmcPlots.R growcurves/R/ddpMCMCplots.R growcurves/R/help.R growcurves/R/ddpgrow.R growcurves/R/dpgrow.R growcurves/R/dateduc.R growcurves/R/growthCurve.R growcurves/R/datbrghtmodterms.R growcurves/R/datbrghtterms.R growcurves/R/datsimcov.R growcurves/R/growplot.R
growcurves/MD5
growcurves/DESCRIPTION
growcurves/man
growcurves/man/dpgrowmult.Rd growcurves/man/mmmultPost.Rd growcurves/man/datbrghtterms.Rd growcurves/man/getmf.Rd growcurves/man/samples.ddpgrow.Rd growcurves/man/dpPost.Rd growcurves/man/dpgrow.Rd growcurves/man/ddpEffectsplot.Rd growcurves/man/growplot.Rd growcurves/man/plot.ddpgrow.Rd growcurves/man/dateduc.Rd growcurves/man/plot.dpgrow.Rd growcurves/man/mmIplusDpPost.Rd growcurves/man/samples.dpgrowmult.Rd growcurves/man/summary.ddpgrow.Rd growcurves/man/datsimmult.Rd growcurves/man/trtplot.Rd growcurves/man/mmCplusDpPost.Rd growcurves/man/summary.dpgrow.Rd growcurves/man/ddpgrow.Rd growcurves/man/datsim.Rd growcurves/man/dpgrowmm.Rd growcurves/man/summary_quantiles.Rd growcurves/man/growcurves-package.Rd growcurves/man/XZcov.Rd growcurves/man/summary.dpgrowmm.Rd growcurves/man/ddp_quantiles.Rd growcurves/man/plot.dpgrowmult.Rd growcurves/man/samples.Rd growcurves/man/growthCurve.Rd growcurves/man/summary.dpgrowmult.Rd growcurves/man/mmIgroupDpPost.Rd growcurves/man/effectsplot.Rd growcurves/man/mmCmvplusDpPost.Rd growcurves/man/mcmcPlots.Rd growcurves/man/plot.dpgrowmm.Rd growcurves/man/ddpMCMCplots.Rd growcurves/man/relabel.Rd growcurves/man/ddpPost.Rd growcurves/man/datsimcov.Rd growcurves/man/lgmPost.Rd growcurves/man/datbrghtmodterms.Rd growcurves/man/samples.dpgrow.Rd

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