Description Usage Arguments Value Note Author(s) See Also
An internal function to dpgrowmm
1 2 | mmCplusDpPost(y, X, Z, Wcase, Wsubject, Omega, omegaplus, groups, subjects,
niter, nburn, nthin, strength.mm, shapealph, ratebeta)
|
y |
An N x 1 response (of subject-measure cases) |
X |
Fixed effects design matrix |
Z |
Random effects design matrix. Assumed grouped by |
Wcase |
An N x 1 multiple membership weight matrix to map supplemental random effects |
Wsubject |
An P.aff x S multiple membership weight matrix with rows equal to number of unique affected subjects |
Omega |
An S x S unnormalized adjacency matrix with entries equal to 1 where two effects communicate and 0, otherwise. Diagonal elements are zero |
omegaplus |
S x 1 vector of row sums of |
groups |
S x 1 vector of group identifiers for each effect. Effects within each group communicate. Effects don't communicate across groups. |
subjects |
An N x 1 set of subject identifiers |
niter |
The number of MCMC iterations |
nburn |
The number of MCMC burn-in iterations to discard |
nthin |
The step increment of MCMC samples to return |
strength.mm |
The shape and rate parameters for the Γ prior on the CAR precision parameter, τ_{γ} |
shapealph |
The shape parameter for the Γ prior on the DP concentration parameter.
The rate parameter is set of |
ratebeta |
The rate parameter for the Γ prior on the DP concentration parameter. Default value is |
res A list object containing MCMC runs for all model parameters.
Intended as an internal function for dpgrowmm
Terrance Savitsky tds151@gmail.com
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