ris used to compute enrichment score (credit to Michael from Berkeley).
charactervectors, named by GO term, of genes associated with each term - can be loaded with
data(GO_gene_sets)[based on Gene Ontology (2015-11-27) and human GO annotations file validated on 07/08/2016]).
gsetis interpreted when vector of scores
ris supplied - now instead of the scores for
Sbeing those at the corresponding ranks in
r, they are those at corresponding indices. For example, in version 1.0 the scores for
S=1:3would be the top 3 scores in
r, however now it be the those of the first 3 elements of
r. Behaviour has not changed for when
Nis used instead of
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