maizeQ: Population structure matrix required for "gwerAM()"

Description Usage Format References

Description

This matrix contains the population structure information required for gwerAM.

Usage

1

Format

The matrix has five columns, one for each subpopulation. Each row gives the probability that the corresponding genotype belongs to the corresponding subpopulations. The data set comprises information from 277 diverse maize inbreds which have been used in the study of Yu et al. (2006).

References

Yu, J., Pressoir, G., Briggs, W.H., Bi, I.V., Yamasaki, M., Doebley, J.F., McMullen, M.D., Gaut, B.S., Holland, J.B., Kresovich, S., and Buckler, E.S. 2006. A unified mixed-model method for association mapping accounting for multiple levels of relatedness. Nature Genetics 38: 203-208.


gwerAM documentation built on May 29, 2017, 7:09 p.m.