Man pages for hsrecombi
Estimation of Recombination Rate and Maternal LD in Half-Sibs

bestmapfunBest fitting genetic-map function
checkCandidatesCandidates for misplacement
countNumbersCount genotype combinations at 2 SNPs
daughterSiretargetregion: allocation of paternal half-sib families
editrawEditing results of hsrecombi
felsensteinFelsenstein's genetic map function
geneticPositionEstimation of genetic position
genotype.chrtargetregion: progeny genotypes
haldaneHaldane's genetic map function
hapSiretargetregion: sire haplotypes
hsrecombiEstimation of recombination rate and maternal LD
karlinLiberman and Karlin's genetic map function
kosambiKosambi's genetic map function
LDHScppExpectation Maximisation (EM) algorithm
loglikfunCalculate log-likelihood function
makehapMake list of imputed sire haplotypes
makehaplistMake list of sire haplotypes
makehappmMake list of imputed haplotypes and estimate recombination...
map.chrtargetregion: physical map
raoSystem of genetic-map functions
rao-inverseApproximation to inverse of Rao's system of map functions
startvalueStart value for maternal allele and haplotype frequencies
targetregionDescription of the targetregion data set
hsrecombi documentation built on June 7, 2023, 6:02 p.m.