loglikfun: Calculate log-likelihood function
In hsrecombi: Estimation of Recombination Rate and Maternal LD in Half-Sibs
loglikfun R Documentation
Calculate log-likelihood function
Description
Calculate log-likelihood function
Arguments
counts
integer vector of observed 2-locus genotype
fAA
frequency of maternal haplotype 1-1
fAB
frequency of maternal haplotype 1-0
fBA
frequency of maternal haplotype 0-1
fBB
frequency of maternal haplotype 0-0
theta
paternal recombination rate
Value
lik value of log likelihood at parameter estimates
hsrecombi documentation built on June 7, 2023, 6:02 p.m.
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| loglikfun | R Documentation |
Calculate log-likelihood function
Description
Calculate log-likelihood function
Arguments
counts |
integer vector of observed 2-locus genotype |
fAA |
frequency of maternal haplotype 1-1 |
fAB |
frequency of maternal haplotype 1-0 |
fBA |
frequency of maternal haplotype 0-1 |
fBB |
frequency of maternal haplotype 0-0 |
theta |
paternal recombination rate |
Value
lik value of log likelihood at parameter estimates
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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