R Documentation |
Print methods for hyper2
and hyper3
objects
## S3 method for class 'hyper2' print(x, ...) ## S3 method for class 'hyper3' print(x, ...)
x |
An object of class |
... |
Further arguments, currently ignored |
Used mainly for their side-effect of printing the log-likelihood
function. In the print method, a natural logarithm is indicated with
“log()
”—not “ln()
”—consistent with R
builtin terminology base::log()
.
The hyper2
print method is sensitive to option
give_warning_on_nonzero_power_sum
. If TRUE
, a warning is
issued if the powers have nonzero sum. This is usually what you want
because observations are typically multinomial. If FALSE
, the
warning is suppressed. One often needs hyper2
objects with
nonzero sum as the following snippet attests:
H1 <- hyper2(list('a'),1) H2 <- hyper2(list('a',c('a','b')),c(1,-1))
Above, both objects are legitimate likelihood functions; both correspond
to the observation “player a
won once”. But they differ
in that H1
corresponds to “player a
came first in a
field of unspecified players” while H2
corresponds to
“player a
came first in a field comprising a
and
b
”. Sometimes you want H1
but (in my experience) mostly
it is a result of coding error. Also note the following snippet:
icons["L"] %<>% inc icons[c("L","NB")] %<>% dec
The above two lines correspond to “Take the icons
likelihood function and add to it the (independent) observation that a
correspondent found ‘London’ to be more concerning than
‘the Norfolk Broads’”. But after the first line and before the
second, icons
has a nonzero power sum, pending addition of
another term. At this point, icons
is arguably an incomplete
likelihood function as the players have not been specified; its nonzero
power sum is an indicator that it is a temporary object. That's OK as
long as we remember to add the denominator (as carried out in the next
line) which would mean multiplying by (L+NB)^{-1}
, restoring the
zero power sum. If we forget to do this, the print method gives us a
warning which should prompt us to check the coding.
Returns the hyper2
or hyper3
object it was sent,
invisibly. Function pnv()
converts a named vector to a
character string that is used in the hyper3
print method.
Robin K. S. Hankin
data(chess) chess
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