plot.ibdreg.unexpect: Plot unconstrained and constrained linkage tests to indicate...

Description Usage Arguments Value See Also

View source: R/plot.ibdreg.unexpect.q


Plot the -log10(pvalue) of the unconstrained and constrained linkage tests to indicate areas of unexpected allele sharing


 ## S3 method for class 'ibdreg.unexpect'
plot(x, status.method="AA", ...)



an ibdreg object


Character string indicating which affection status for relative pairs ("AA", "AU", or "UU") is to be examined for unexpected IBD sharing. Character string indicating which relative pairs to display linkage tests for: "AA", "AU", or "UU". These correspond to: Affected-Affected, Affected-Unaffected, and Unaffected-Unaffected, respectively.


extra parameters for the plot method. This method looks for a 'title' parameter.


nothing is returned

See Also

plot.ibdreg, ibdreg

ibdreg documentation built on May 20, 2017, 3:15 a.m.

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