ibdsim2: Simulation of Chromosomal Regions Shared by Family Members

Simulation of segments shared identical-by-descent (IBD) by pedigree members. Using sex specific recombination rates along the human genome (Halldorsson et al. (2019) <doi:10.1126/science.aau1043>), phased chromosomes are simulated for all pedigree members. Additional features include calculation of realised IBD coefficients and plots of IBD segment distributions.

Getting started

Package details

AuthorMagnus Dehli Vigeland [aut, cre] (<https://orcid.org/0000-0002-9134-4962>)
MaintainerMagnus Dehli Vigeland <m.d.vigeland@medisin.uio.no>
LicenseGPL-3
Version1.3.0
URL https://github.com/magnusdv/ibdsim2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("ibdsim2")

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ibdsim2 documentation built on Nov. 13, 2020, 5:06 p.m.