Man pages for ibdsim2
Simulation of Chromosomal Regions Shared by Family Members
| convertPos | Conversion of genetic map positions |
| customMap | Custom recombination map |
| estimateCoeffs | Estimation of one- and two-locus relatedness coefficients |
| extractIds | Extract ID labels from simulation output |
| findPattern | Find specific IBD patterns |
| haploDraw | Draw haplotypes onto a pedigree plot |
| ibdsim | IBD simulation |
| ibdsim2-package | ibdsim2: Simulation of Chromosomal Regions Shared by Family... |
| karyoDiploid | Diploid karyogram |
| karyogram2 | Karyogram plots |
| karyoHaploid | Haploid karyogram |
| launchApp | Launch the ibdsim2 app |
| loadMap | Load a built-in genetic map |
| maplengths | Physical and genetic map lengths |
| plotSegmentDistribution | Scatter plots of IBD segment distributions |
| profileSimIBD | Simulate markers conditional on a given IBD pattern |
| realised | Realised relatedness |
| segmentStats | Summary statistics for identified segments |
| uniformMap | Uniform recombination maps |
| zeroIBD | Probability of zero IBD |
