API for ibdsim2
Simulation of Chromosomal Regions Shared by Family Members

Global functions
.comb2 Source code
.getAlleles Source code
.plotSegDist Source code
.sortDouble Source code
`%||%` Source code
`[.genomeMap` Source code
addRect Source code
addStates Source code
chromMap Source code
convertPos Man page Source code
customMap Man page Source code
distributeFounderAlleles Source code
estimateCoeffs Man page
estimateIdentity Man page Source code
estimateInbreeding Man page Source code
estimateKappa Man page Source code
estimateKinship Man page Source code
estimateTwoLocusIdentity Man page Source code
estimateTwoLocusInbreeding Man page Source code
estimateTwoLocusKappa Man page Source code
estimateTwoLocusKinship Man page Source code
extractIdsFromSegmentSummary Source code
findPattern Man page Source code
genedrop Source code
genedrop.singlechrom Source code
genomeMap Source code
haploDraw Man page Source code
ibdsim Man page Source code
ibdsim2 Man page
isChromMap Source code
isCount Source code
isGenomeMap Source code
jacquardState Source code
loadMap Man page Source code
mapLen Man page Source code
mapLen.chromMap Man page Source code
mapLen.genomeMap Man page Source code
maplengths Man page
meiosis Source code
mergeAdjacent Source code
mergeConsecutiveSegments Source code
physRange Man page Source code
physRange.chromMap Man page Source code
physRange.genomeMap Man page Source code
plotSegmentDistribution Man page Source code
plotSegmentDistribution.autoz Source code
plotSegmentDistribution.ibd1 Source code
pos2allele Source code
print.chromMap Source code
print.genomeMap Source code
print.genomeSimList Source code
profileSimIBD Man page Source code
realised Man page
realisedIdentity Man page Source code
realisedInbreeding Man page Source code
realisedKappa Man page Source code
realisedKinship Man page Source code
recombine Source code
segmentSummary Source code
stop2 Source code
toString2 Source code
uniformMap Man page Source code
zeroIBD Man page Source code
ibdsim2 documentation built on Nov. 13, 2020, 5:06 p.m.