Global functions | |
---|---|
.add_clone_count | Source code |
.calc_vdj_occ | Source code |
.dropout_VDJ | Source code |
.get_AA_freq_distribution | Source code |
.immuneSim_random | Source code |
.immuneSim_standard | Source code |
.kmer_occurrence_opt_k_m_gen | Source code |
.make_kmer_dictionary | Source code |
.new_insertion_deletion_df | Source code |
.noiseify_VDJ_freqs | Source code |
.plot_report_repertoire_AA_freq | Source code |
.plot_report_repertoire_AA_freq_comparative | Source code |
.plot_vdj_occ | Source code |
.record_shm_events | Source code |
.somatic_hypermutation_sim | Source code |
.theme.akbar | Source code |
.update_vdj_freqs | Source code |
codon_replacement | Man page Source code |
codon_replacement_reconstruction | Man page Source code |
combine_into_paired | Man page Source code |
gen_code | Man page |
hotspot_df | Man page |
hub_seqs_exclusion | Man page Source code |
immuneSIM | Man page Source code |
insertions_and_deletion_lengths_df | Man page |
length_dist_simulation | Man page |
list_example_repertoires | Man page |
list_germline_genes_allele_01 | Man page |
load_insdel_data | Man page Source code |
motif_implantation | Man page Source code |
one_spot_df | Man page |
plot_repertoire_A_vs_B | Man page Source code |
plot_report_repertoire | Man page Source code |
shm_event_reconstruction | Man page Source code |
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